Mechanism of the quorum-quenching lactonase (AiiA) from Bacillus thuringiensis.: 1.: Product-bound structures

被引:85
作者
Liu, Dali
Momb, Jessica
Thomas, Pei W.
Moulin, Aaron
Petsko, Gregory A.
Fast, Walter
Ringe, Dagmar
机构
[1] Brandeis Univ, Dept Chem, Waltham, MA 02454 USA
[2] Brandeis Univ, Dept Biochem, Waltham, MA 02454 USA
[3] Brandeis Univ, Rosenstiel Basic Med Sci Res Ctr, Waltham, MA 02454 USA
[4] Univ Texas Austin, Div Med Chem, Coll Pharm, Grad Program Biochem, Austin, TX 78712 USA
[5] Univ Texas Austin, Texas Inst Drug & Diagnost Dev, Austin, TX 78712 USA
关键词
D O I
10.1021/bi800368y
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Enzymes capable of hydrolyzing N-acyl-L-homoserine lactones (AHLs) used in some bacterial quorum-sensing pathways are of considerable interest for their ability to block undesirable phenotypes. Most known AHL hydrolases that catalyze ring opening (AHL lactonases) are members of the metallo-beta-lactamase enzyme superfamily and rely on a dinuclear zinc site for catalysis and stability. Here we report the three-dimensional structures of three product complexes formed with the AHL lactonase from Bacillus thuringiensis. Structures of the lactonase bound with two different concentrations of the ring-opened product of N-hexanoyl-L-homoserine lactone are determined at 0.95 and 1.4 angstrom resolution and exhibit different product configurations. A structure of the ring opened product of the non-natural N-hexanoyl-L-homocysteine thiolactone at 1.3 angstrom resolution is also determined. On the basis of these product-bound structures, a substrate-binding model is presented that differs from previous proposals. Additionally, the proximity of the product to active-site residues and observed changes in protein conformation and metal coordination provide insight into the catalytic mechanism of this quorum-quenching metalloenzyme.
引用
收藏
页码:7706 / 7714
页数:9
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