The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources

被引：129

作者：

Arnaud, Martha B. ^{[1
]}

Cerqueira, Gustavo C. ^{[2
]}

Inglis, Diane O. ^{[1
]}

Skrzypek, Marek S. ^{[1
]}

Binkley, Jonathan ^{[1
]}

Chibucos, Marcus C. ^{[3
]}

Crabtree, Jonathan ^{[3
]}

Howarth, Clinton ^{[2
]}

Orvis, Joshua ^{[3
]}

Shah, Prachi ^{[1
]}

Wymore, Farrell ^{[1
]}

Binkley, Gail ^{[1
]}

Miyasato, Stuart R. ^{[1
]}

Simison, Matt ^{[1
]}

Sherlock, Gavin ^{[1
]}

Wortman, Jennifer R. ^{[2
]}

机构：

[1] Stanford Univ, Sch Med, Dept Genet, Stanford, CA 94305 USA

[2] 7 Cambridge Ctr, Broad Inst, Cambridge, MA 02141 USA

[3] Univ Maryland, Sch Med, Inst Genome Sci, Baltimore, MD 21201 USA

来源：

NUCLEIC ACIDS RESEARCH | 2012年 / 40卷 / D1期

基金：

美国国家卫生研究院;

关键词：

IDENTIFICATION; ANNOTATION; NIDULANS; SEQUENCE; GENES;

D O I：

10.1093/nar/gkr875

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The Aspergillus Genome Database (AspGD; http://www.aspgd.org) is a freely available, web-based resource for researchers studying fungi of the genus Aspergillus, which includes organisms of clinical, agricultural and industrial importance. AspGD curators have now completed comprehensive review of the entire published literature about Aspergillus nidulans and Aspergillus fumigatus, and this annotation is provided with streamlined, ortholog-based navigation of the multispecies information. AspGD facilitates comparative genomics by providing a full-featured genomics viewer, as well as matched and standardized sets of genomic information for the sequenced aspergilli. AspGD also provides resources to foster interaction and dissemination of community information and resources. We welcome and encourage feedback at aspergillus-curator@lists.stanford.edu.

引用

页码：D653 / D659

页数：7

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