Nematode-specific PCR primers for the 18S small subunit rRNA gene
被引:263
作者:
Floyd, RM
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机构:British Antarctic Survey, NERC, Cambridge CB3 0ET, England
Floyd, RM
Rogers, AD
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机构:British Antarctic Survey, NERC, Cambridge CB3 0ET, England
Rogers, AD
Lambshead, PJD
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机构:British Antarctic Survey, NERC, Cambridge CB3 0ET, England
Lambshead, PJD
Smith, CR
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机构:British Antarctic Survey, NERC, Cambridge CB3 0ET, England
Smith, CR
机构:
[1] British Antarctic Survey, NERC, Cambridge CB3 0ET, England
[2] Nat Hist Museum, Dept Zool, London SW7 5BD, England
[3] Univ Hawaii Manoa, Dept Oceanog, Honolulu, HI 96822 USA
来源:
MOLECULAR ECOLOGY NOTES
|
2005年
/
5卷
/
03期
关键词:
nematodes;
185 ribosomal RNA (SSU);
specific amplification;
DNA barcoding;
D O I:
10.1111/j.1471-8286.2005.01009.x
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
A set of polymerase chain reaction primers were designed, which amplify a c.1 kb fragment of the 18S ribosomal DNA gene, and are specific to the phylum Nematoda. These have proven useful in isolating nematode genes from samples mixed with other biological material, particularly with application to DNA barcoding. Optimal reaction conditions are described. These primers have successfully amplified the correct fragment from a wide phylogenetic range of nematodes, and have so far generated no sequences from any other organismal group.