Deamination as the basis of strand-asymmetric evolution in transcribed Escherichia coli sequences

被引：84

作者：

Francino, MP

Ochman, H

机构：

[1] Univ Arizona, Dept Ecol & Evolutionary Biol, Tucson, AZ 85721 USA

[2] Univ Rochester, Dept Biol, Rochester, NY 14627 USA

来源：

MOLECULAR BIOLOGY AND EVOLUTION | 2001年 / 18卷 / 06期

关键词：

cytosine deamination; substitution patterns; strand asymmetry; transcription-induced mutations; noncoding DNA; Escherichia coli;

D O I：

10.1093/oxfordjournals.molbev.a003888

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

引用

页码：1147 / 1150

页数：4

共 23 条

[1]

[Anonymous], 1998, Science

[2] Transcription-induced mutations: Increase in C to T mutations in the nontranscribed strand during transcription in Escherichia coli [J].

Beletskii, A ;

Bhagwat, AS .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (24) :13919-13924

[3] Mutations induced by bacteriophage T7 RNA polymerase and their effects on the composition of the T7 genome [J].

Beletskii, A ;

Grigoriev, A ;

Joyce, S ;

Bhagwat, AS .

JOURNAL OF MOLECULAR BIOLOGY, 2000, 300 (05) :1057-1065

[4] The complete genome sequence of Escherichia coli K-12 [J].

Blattner, FR ;

Plunkett, G ;

Bloch, CA ;

Perna, NT ;

Burland, V ;

Riley, M ;

ColladoVides, J ;

Glasner, JD ;

Rode, CK ;

Mayhew, GF ;

Gregor, J ;

Davis, NW ;

Kirkpatrick, HA ;

Goeden, MA ;

Rose, DJ ;

Mau, B ;

Shao, Y .

SCIENCE, 1997, 277 (5331) :1453-+

[5] Transcriptional regulation of the aconitase genes (acnA and acnB) of Escherichia coli [J].

Cunningham, L ;

Gruer, MJ ;

Guest, JR .

MICROBIOLOGY-UK, 1997, 143 :3795-3805

[6] Asymmetries generated by transcription-coupled repair in enterobacterial genes [J].

Francino, MP ;

Chao, L ;

Riley, MA ;

Ochman, H .

SCIENCE, 1996, 272 (5258) :107-109

[7] Strand asymmetries in DNA evolution [J].

Francino, MP ;

Ochman, H .

TRENDS IN GENETICS, 1997, 13 (06) :240-245

[8] A comparative genomics approach to DNA asymmetry [J].

Francino, MP ;

Ochman, H .

MOLECULAR STRATEGIES IN BIOLOGICAL EVOLUTION, 1999, 870 :428-431

[9] Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms [J].

Frank, AC ;

Lobry, JR .

GENE, 1999, 238 (01) :65-77

[10] Cytosine deamination plays a primary role in the evolution of mammalian isochores [J].

Fryxell, KJ ;

Zuckerkandl, E .

MOLECULAR BIOLOGY AND EVOLUTION, 2000, 17 (09) :1371-1383

← 1 2 3 →