Soluble oligomerization provides a beneficial fitness effect on destabilizing mutations

被引:80
作者
Bershtein, Shimon [1 ]
Mu, Wanmeng [1 ,2 ]
Shakhnovich, Eugene I. [1 ]
机构
[1] Harvard Univ, Dept Chem & Chem Biol, Cambridge, MA 02138 USA
[2] Jiangnan Univ, State Key Lab Food Sci & Technol, Wuxi 214122, Peoples R China
基金
美国国家卫生研究院;
关键词
fitness landscape; genotype-phenotype relation; molecular evolution; protein solubility; protein aggregation; PROTEIN STABILITY; EVOLUTION; DOMAIN; DYNAMICS; THERMODYNAMICS; AGGREGATION; LANDSCAPE; PHYSICS; MODEL;
D O I
10.1073/pnas.1118157109
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Mutations create the genetic diversity on which selective pressures can act, yet also create structural instability in proteins. How, then, is it possible for organisms to ameliorate mutation-induced perturbations of protein stability while maintaining biological fitness and gaining a selective advantage? Here we used site-specific chromosomal mutagenesis to introduce a selected set of mostly destabilizing mutations into folA-an essential chromosomal gene of Escherichia coli encoding dihydrofolate reductase (DHFR)-to determine how changes in protein stability, activity, and abundance affect fitness. In total, 27 E. coli strains carrying mutant DHFR were created. We found no significant correlation between protein stability and its catalytic activity nor between catalytic activity and fitness in a limited range of variation of catalytic activity observed in mutants. The stability of these mutants is strongly correlated with their intracellular abundance, suggesting that protein homeo-static machinery plays an active role in maintaining intracellular concentrations of proteins. Fitness also shows a significant correlation with intracellular abundance of soluble DHFR in cells growing at 30 degrees C. At 42 degrees C, the picture was mixed, yet remarkable: A few strains carrying mutant DHFR proteins aggregated, rendering them nonviable, but, intriguingly, the majority exhibited fitness higher than wild type. We found that mutational destabilization of DHFR proteins in E. coli is counterbalanced at 42 degrees C by their soluble oligomerization, thereby restoring structural stability and protecting against aggregation.
引用
收藏
页码:4857 / 4862
页数:6
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