Reassignment of sense codons in vivo

被引:83
作者
Link, AJ [1 ]
Tirrell, DA [1 ]
机构
[1] CALTECH, Div Chem & Chem Engn, Pasadena, CA 91125 USA
关键词
codon degeneracy; non-canonical amino acids; aminoacyl-tRNA synthetases; aminoacylation;
D O I
10.1016/j.ymeth.2005.04.005
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The genetic code maps one or more of the 61 sense codons onto a set of 20 canonical amino acids. Reassignment of sense codons to non-canonical amino acids in model organisms such as Escherichia coli has been achieved through manipulation of the cellular protein synthesis machinery. Specifically, control of amino acid pools, coupled with engineering of the aminoacyl-tRNA synthetase activity of the host, has enabled assignment of sense codons to a wide variety of non-canonical amino acids under conditions routinely used for expression of recombinant proteins. Codon reassignment is leading to important advances in protein engineering and bioorganic chemistry. Here we summarize some of those advances, and provide detailed protocols for codon reassignment. (c) 2005 Elsevier Inc. All rights reserved.
引用
收藏
页码:291 / 298
页数:8
相关论文
共 48 条
[1]   Expansion of the genetic code enables design of a novel "gold'' class of green fluorescent proteins [J].
Bae, JH ;
Rubini, M ;
Jung, G ;
Wiegand, G ;
Seifert, MHJ ;
Azim, MK ;
Kim, JS ;
Zumbusch, A ;
Holak, TA ;
Moroder, L ;
Huber, R ;
Budisa, N .
JOURNAL OF MOLECULAR BIOLOGY, 2003, 328 (05) :1071-1081
[2]   Incorporation of β-selenolo[3,2-b]pyrrolyl-alanine into proteins for phase determination in protein X-ray crystallography [J].
Bae, JH ;
Alefelder, S ;
Kaiser, JT ;
Friedrich, R ;
Moroder, L ;
Huber, R ;
Budisa, N .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 309 (04) :925-936
[3]   Photoreactive bicyclic amino acids as substrates for mutant Escherichia coli phenylalanyl-tRNA synthetases [J].
Bentin, T ;
Hamzavi, R ;
Salomonsson, J ;
Roy, H ;
Ibba, M ;
Nielsen, PE .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (19) :19839-19845
[4]   Hydrolytic editing by a class II aminoacyl-tRNA synthetase [J].
Beuning, PJ ;
Musier-Forsyth, K .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (16) :8916-8920
[5]   Prolegomena to future experimental efforts on genetic code engineering by expanding its amino acid repertoire [J].
Budisa, N .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2004, 43 (47) :6426-6463
[6]  
Budisa N, 2002, ANGEW CHEM INT EDIT, V41, P4066, DOI 10.1002/1521-3773(20021104)41:21<4066::AID-ANIE4066>3.0.CO
[7]  
2-6
[8]   Proteins with β-(thienopyrrolyl)alanines as alternative chromophores and pharmaceutically active amino acids [J].
Budisa, N ;
Alefelder, S ;
Bae, JH ;
Golbik, R ;
Minks, C ;
Huber, R ;
Moroder, L .
PROTEIN SCIENCE, 2001, 10 (07) :1281-1292
[9]  
COHEN GN, 1957, CR HEBD ACAD SCI, V244, P680
[10]   BIOSYNTHESIS BY ESCHERICHIA-COLI OF ACTIVE ALTERED PROTEINS CONTAINING SELENIUM INSTEAD OF SULFUR [J].
COWIE, DB ;
COHEN, GN .
BIOCHIMICA ET BIOPHYSICA ACTA, 1957, 26 (02) :252-261