Cold adaptation of a psychrophilic chitinase: a mutagenesis study

被引:20
作者
Mavromatis, K
Feller, G
Kokkinidis, M
Bouriotis, V
机构
[1] Univ Crete, Dept Biol, Div Appl Biol & Biotechnol, Iraklion 71110, Crete, Greece
[2] Inst Mol Biol & Biotechnol, Enzyme Technol Div, Iraklion 71110, Crete, Greece
[3] Univ Liege, Inst Chem B6, Biochem Lab, B-4000 Liege, Belgium
来源
PROTEIN ENGINEERING | 2003年 / 16卷 / 07期
关键词
chitinases; cold adaptation; mutagenesis; psychrophilic enzyme; thermostability;
D O I
10.1093/protein/gzg069
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The gene encoding chitinase ArChiB from the Antarctic Arthrobacter sp. TAD20 has been expressed in Escherichia coli and the recombinant enzyme purified to homogeneity. In an effort to engineer cold-adapted biocatalysts through rational redesign to operate at elevated temperatures, we performed several mutations aiming to increase the rigidity of the molecular edifice of the selected psychrophilic chitinase. The mutations were designed on the basis of a homology-based three-dimensional model of the enzyme, and included an attempt to introduce a salt bridge (mutant N198K) and replacements of selected Gly residues by either Pro (mutants G93P, G254P) or Gln (G406Q). Mutant N198K resulted in a more stable protein (DeltaT(m)=0.6degreesC). Mutant G93P exhibited a DeltaT(m) of 1.2degreesC, while mutants G254P and G406Q exhibited decreased stability. We conclude that the effect of mutating Gly residues on enzyme stability is rather complex and can only be understood in the context of the structural environment. Kinetic and spectroscopic analysis of these enzyme variants revealed that the kinetic parameters k(cat) and K-m have been significantly modified.
引用
收藏
页码:497 / 503
页数:7
相关论文
共 37 条
[1]   Structures of the psychrophilic Alteromonas haloplanctis α-amylase give insights into cold adaptation at a molecular level [J].
Aghajari, N ;
Feller, G ;
Gerday, C ;
Haser, R .
STRUCTURE, 1998, 6 (12) :1503-1516
[2]  
[Anonymous], 2012, Introduction to protein structure
[3]   How enzymes adapt: lessons from directed evolution [J].
Arnold, FH ;
Wintrode, PL ;
Miyazaki, K ;
Gershenson, A .
TRENDS IN BIOCHEMICAL SCIENCES, 2001, 26 (02) :100-106
[4]   BETA-LACTAMASE MUTATIONS FAR FROM THE ACTIVE-SITE INFLUENCE INHIBITOR BINDING [J].
BONOMO, RA ;
DAWES, CG ;
KNOX, JR ;
SHLAES, DM .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 1995, 1247 (01) :121-125
[5]   FREE R-VALUE - A NOVEL STATISTICAL QUANTITY FOR ASSESSING THE ACCURACY OF CRYSTAL-STRUCTURES [J].
BRUNGER, AT .
NATURE, 1992, 355 (6359) :472-475
[6]   Structural determinants of cold adaptation and stability in a large protein [J].
D'Amico, S ;
Gerday, C ;
Feller, G .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (28) :25791-25796
[7]   Psychrophilic enzymes: molecular basis of cold adaptation [J].
Feller, G ;
Gerday, C .
CELLULAR AND MOLECULAR LIFE SCIENCES, 1997, 53 (10) :830-841
[8]   Molecular adaptations of enzymes from psychrophilic organisms [J].
Feller, G ;
Arpigny, JL ;
Narinx, E ;
Gerday, C .
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY, 1997, 118 (03) :495-499
[9]  
Feller G, 1996, FEMS MICROBIOL REV, V18, P189, DOI 10.1016/0168-6445(96)00011-3
[10]   Hot spots in cold adaptation:: Localized increases in conformational flexibility in lactate dehydrogenase A4 orthologs of Antarctic notothenioid fishes [J].
Fields, PA ;
Somero, GN .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (19) :11476-11481