Purification and crystallization of Escherichia coli pseudouridine synthase RluD

被引:4
作者
Del Campo, M [1 ]
Ofengand, J [1 ]
Malhotra, A [1 ]
机构
[1] Univ Miami, Sch Med, Dept Biochem & Mol Biol, Miami, FL 33101 USA
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 2003年 / 59卷
关键词
D O I
10.1107/S0907444903018468
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
RluD is the pseudouridine (Psi) synthase responsible for forming Psi1911, Psi1915 and Psi1917 in Escherichia coli 23S RNA. Out of the 11 Psi synthases in E. coli, only cells lacking RluD show a severe growth defect. In addition, RluD belongs to the RluA family of Psi synthases, one of the two remaining families without a representative crystal structure. In this paper, the crystallization of selenomethionine-substituted RluD by the hanging-drop method is reported. The crystals diffract to 1.9 Angstrom and belong to space group P4(3)2(1)2, with unit-cell parameters a = b = 75.14, c = 181.81 Angstrom. Synchrotron radiation was used on a single crystal to collect a complete multiwavelength anomalous dispersion (MAD) data set to 2.0 Angstrom resolution.
引用
收藏
页码:1871 / 1873
页数:3
相关论文
共 22 条
[1]  
Charette M, 2000, IUBMB LIFE, V49, P341
[2]  
Del Campo M, 2001, RNA, V7, P1603
[3]  
Foster PG, 2000, NAT STRUCT BIOL, V7, P23
[4]   A second function for pseudouridine syntheses:: A point mutant of RluD unable to form pseudouridines 1911, 1915, and 1917 in Escherichia coli 23S ribosomal RNA restores normal growth to an RluD-minus strain [J].
Gutgsell, NS ;
Del Campo, M ;
Raychaudhuri, S ;
Ofengand, J .
RNA, 2001, 7 (07) :990-998
[5]   Cocrystal structure of a tRNA Ψ55 pseudouridine synthase:: Nucleotide flipping by an RNA-modifying enzyme [J].
Hoang, C ;
Ferré-D'Amaré, AR .
CELL, 2001, 107 (07) :929-939
[6]   A novel unanticipated type of pseudouridine synthase with homologs in bacteria, archaea, and eukarya [J].
Kaya, Y ;
Ofengand, J .
RNA, 2003, 9 (06) :711-721
[7]   Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs [J].
Kiss, T .
EMBO JOURNAL, 2001, 20 (14) :3617-3622
[8]   Pseudouridine synthases: Four families of enzymes containing a putative uridine-binding motif also conserved in dUTPases and dCTP deaminases [J].
Koonin, EV .
NUCLEIC ACIDS RESEARCH, 1996, 24 (12) :2411-2415
[9]   The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA [J].
Liang, XH ;
Xu, YX ;
Michaeli, S .
RNA, 2002, 8 (02) :237-246
[10]   SOLVENT CONTENT OF PROTEIN CRYSTALS [J].
MATTHEWS, BW .
JOURNAL OF MOLECULAR BIOLOGY, 1968, 33 (02) :491-+