Optimized set of two-dimensional experiments for fast sequential assignment, secondary structure determination, and backbone fold validation of 13C/15N-labelled proteins

被引:35
作者
Bersch, B
Rossy, E
Covès, J
Brutscher, B
机构
[1] UJF, CNRS, UMR 5075, Inst Biol Struct Jean Pierre Ebel, F-38027 Grenoble, France
[2] UJF, CEA, CNRS,UMR 5047, Lab Chim & Biochim,Ctr Redox Biol, F-38054 Grenoble 9, France
关键词
high throughput NMR; reduced dimensionality; resonance assignment; residual dipolar couplings;
D O I
10.1023/A:1024746306675
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
NMR experiments are presented which allow backbone resonance assignment, secondary structure identification, and in favorable cases also molecular fold topology determination from a series of two-dimensional H-1-N-15 HSQC-like spectra. The H-1-N-15 correlation peaks are frequency shifted by an amount +/- omega(X) along the N-15 dimension, where omega(X) is the C-alpha, C-beta, or H-alpha frequency of the same or the preceding residue. Because of the low dimensionality (2D) of the experiments, high-resolution spectra are obtained in a short overall experimental time. The whole series of seven experiments can be performed in typically less than one day. This approach significantly reduces experimental time when compared to the standard 3D-based methods. The here presented methodology is thus especially appealing in the context of high-throughput NMR studies of protein structure, dynamics or molecular interfaces.
引用
收藏
页码:57 / 67
页数:11
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