A repeated β-turn structure in poly(Ala-Gly) as a model for silk I of Bombyx mori silk fibroin studied with two-dimensional spin-diffusion NMR under off magic angle spinning and rotational echo double resonance

被引:211
作者
Asakura, T [1 ]
Ashida, J
Yamane, T
Kameda, T
Nakazawa, Y
Ohgo, K
Komatsu, K
机构
[1] Tokyo Univ Agr & Technol, Dept Biotechnol, Koganei, Tokyo 1848588, Japan
[2] Varian Technol Japan Ltd, Minato Ku, Tokyo 1080023, Japan
[3] Biooriented Technol Res Advancement Inst, Minato Ku, Tokyo 1050001, Japan
关键词
2D spin-diffusion NMR; rotational-echo double-resonance; silk fibroin; silk I; beta-turn type II structure;
D O I
10.1006/jmbi.2000.4394
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The structure of a crystalline form of Bombyx mori silk fibroin, commonly found before the spinning process (known as silk I), was proposed by combining data obtained from two-dimensional spin-diffusion nuclear magnetic resonance under off magic angle spinning, rotational-echo double-resonance (REDOR), previously reported X-ray diffraction analyses and C-13 NMR chemical shifts. Instead of B. mori silk fibroin with silk I structure, we used the sequential model peptide (Ala-Gly)(15). The structure of the sequential model peptide is characterized as silk I after dissolving the peptide in 9 M LiBr and then dialyzing against water. Moreover, C-13 or N-15-labeled sites may be introduced easily at any position in (Ala-Gly)(15) by the solid phase synthesis method for these NMR experiments. The torsional angles of (Ala-Gly)(15) with silk I structure were determined as (-60(+/-5)degrees, 130(+/-5)degrees) and (70(+/-5)degrees, 30(+/-5)degrees) for Ala and Gly residues, respectively. The formation of the intra-molecular hydrogen bonding along the chain was confirmed from REDOR NMR by determination of the inter-atomic distance between the nitrogen and carbon atoms comprising the intra-molecular hydrogen bonding. The structure is named a repeated beta -turn type II-like structure. (C) 2001 Academic Press.
引用
收藏
页码:291 / 305
页数:15
相关论文
共 48 条
  • [1] Anderson JP, 1998, BIOPOLYMERS, V45, P307
  • [2] CONFORMATION CHARACTERIZATION OF BOMBYX-MORI SILK FIBROIN IN THE SOLID-STATE BY HIGH-FREQUENCY C-13 CROSS POLARIZATION MAGIC ANGLE SPINNING NMR, X-RAY-DIFFRACTION, AND INFRARED-SPECTROSCOPY
    ASAKURA, T
    KUZUHARA, A
    TABETA, R
    SAITO, H
    [J]. MACROMOLECULES, 1985, 18 (10) : 1841 - 1845
  • [3] Asakura T, 1997, BIOPOLYMERS, V41, P193, DOI 10.1002/(SICI)1097-0282(199702)41:2<193::AID-BIP6>3.0.CO
  • [4] 2-O
  • [5] STRUCTURE OF BOMBYX-MORI SILK FIBROIN STUDIED BY REDOR NMR-SPECTROSCOPY
    ASAKURA, T
    AOKI, A
    DEMURA, M
    JOERS, JM
    ROSANSKE, RC
    GULLION, T
    [J]. POLYMER JOURNAL, 1994, 26 (12) : 1405 - 1408
  • [6] Determination of the mutual orientation of the 15N and 13C NMR chemical shift tensors of 13C-15N double labeled model peptides for silk fibroin from the dipolar-coupled powder patterns
    Asakura, T
    Yamazaki, Y
    Seng, KW
    Demura, M
    [J]. JOURNAL OF MOLECULAR STRUCTURE, 1998, 446 (03) : 179 - 190
  • [7] ASAKURA T, 1987, Journal of Sericultural Science of Japan, V56, P300
  • [8] Structural analysis of silk with 13C NMR chemical shift contour plots
    Asakura, T
    Iwadate, M
    Demura, M
    Williamson, MP
    [J]. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 1999, 24 (2-3) : 167 - 171
  • [9] Asakura T., 1994, Encyclopedia of AgriculturalScience, P1
  • [10] Ashida J., 1990, P NMR C KYOT, P245