The interaction of eIF4E with 4E-BP1 is an induced fit to a completely disordered protein

被引:66
作者
Fletcher, CM [1 ]
Wagner, G [1 ]
机构
[1] Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USA
关键词
induced fit; NMR assignments; relaxation measurements; translational control; unstructured protein;
D O I
10.1002/pro.5560070720
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
4E binding protein 1 (4E-BP1) inhibits translation by binding to the initiation factor eIF4E and is mostly or completely unstructured in both free and bound states. We wished to determine whether the free protein has local structure that could be involved in eIF4E binding. Assignments were obtained using double and triple resonance NMR methods. Residues 4-10, 43-46, and 56-65 could not be assigned, primarily because of a high degree of H-1 and N-15 chemical shift overlap. steady-state {H-1}-N-15 NOEs were measured for 45 residues in the assigned regions. Except for the two C-terminal residues, the NOEs were between - 0.77 and - 1.14, indicating a high level of flexibility. Furthermore, the {H-1}-N-15 NOE spectrum recorded with presaturation contained no strong positive signals, making it likely that no other residues have positive or smaller negative NOEs. This implies that 4E-BPI has no regions of local order in the absence of eIF4E. The interaction therefore appears to be an induced fit to a completely disordered protein molecule.
引用
收藏
页码:1639 / 1642
页数:4
相关论文
共 18 条
[1]   THE PROGRAM XEASY FOR COMPUTER-SUPPORTED NMR SPECTRAL-ANALYSIS OF BIOLOGICAL MACROMOLECULES [J].
BARTELS, C ;
XIA, TH ;
BILLETER, M ;
GUNTERT, P ;
WUTHRICH, K .
JOURNAL OF BIOMOLECULAR NMR, 1995, 6 (01) :1-10
[2]  
Cho HS, 1996, PROTEIN SCI, V5, P262
[3]   The C-terminal half of the anti-sigma factor, FlgM, becomes structured when bound to its target, sigma(28) [J].
Daughdrill, GW ;
Chadsey, MS ;
Karlinsey, JE ;
Hughes, KT ;
Dahlquist, FW .
NATURE STRUCTURAL BIOLOGY, 1997, 4 (04) :285-291
[4]   BACKBONE DYNAMICS OF A FREE AND A PHOSPHOPEPTIDE-COMPLEXED SRC HOMOLOGY-2 DOMAIN STUDIED BY N-15 NMR RELAXATION [J].
FARROW, NA ;
MUHANDIRAM, R ;
SINGER, AU ;
PASCAL, SM ;
KAY, CM ;
GISH, G ;
SHOELSON, SE ;
PAWSON, T ;
FORMANKAY, JD ;
KAY, LE .
BIOCHEMISTRY, 1994, 33 (19) :5984-6003
[5]   4E binding proteins inhibit the translation factor eIF4E without folded structure [J].
Fletcher, CM ;
McGuire, AM ;
Gingras, AC ;
Li, HJ ;
Matsuo, H ;
Sonenberg, N ;
Wagner, G .
BIOCHEMISTRY, 1998, 37 (01) :9-15
[6]   ENHANCED-SENSITIVITY TRIPLE-RESONANCE SPECTROSCOPY WITH MINIMAL H2O SATURATION [J].
KAY, LE ;
XU, GY ;
YAMAZAKI, T .
JOURNAL OF MAGNETIC RESONANCE SERIES A, 1994, 109 (01) :129-133
[7]  
MADER S, 1995, MOL CELL BIOL, V15, P4990
[8]   A sensitive HN(CA)CO experiment for deuterated proteins [J].
Matsuo, H ;
Li, HJ ;
Wagner, G .
JOURNAL OF MAGNETIC RESONANCE SERIES B, 1996, 110 (01) :112-115
[9]   INSULIN-DEPENDENT STIMULATION OF PROTEIN-SYNTHESIS BY PHOSPHORYLATION OF A REGULATOR OF 5'-CAP FUNCTION [J].
PAUSE, A ;
BELSHAM, GJ ;
GINGRAS, AC ;
DONZE, O ;
LIN, TA ;
LAWRENCE, JC ;
SONENBERG, N .
NATURE, 1994, 371 (6500) :762-767
[10]   NMR analysis of main-chain conformational preferences in an unfolded fibronectin-binding protein [J].
Penkett, CJ ;
Redfield, C ;
Dodd, I ;
Hubbard, J ;
McBay, DL ;
Mossakowska, DE ;
Smith, RAG ;
Dobson, CM ;
Smith, LJ .
JOURNAL OF MOLECULAR BIOLOGY, 1997, 274 (02) :152-159