Aptamer-DNAzyme hairpins for biosensing of Ochratoxin A

被引:122
作者
Yang, Cheng [1 ,2 ]
Lates, Vasilica [3 ]
Prieto-Simon, Beatriz [4 ]
Marty, Jean-Louis [3 ]
Yang, Xiurong [1 ]
机构
[1] Chinese Acad Sci, Changchun Inst Appl Chem, State Key Lab Elect Chem, Changchun 130022, Jilin, Peoples R China
[2] Chinese Acad Sci, Grad Sch, Beijing 100039, Peoples R China
[3] Univ Perpignan, IMAGES EA 4218, F-66860 Perpignan, France
[4] Inst Bioengn Catalunya IBEC, Barcelona 08028, Spain
基金
中国国家自然科学基金;
关键词
Ochratoxin A; Aptamer; G-quadruplex; DNAzyme; Hairpin; LINKED-IMMUNOSORBENT-ASSAY; G-QUADRUPLEX APTAMERS; SINGLE-STRANDED-DNA; MOLECULES; SELECTION; ENZYME; INVITRO; LIGANDS; BIND;
D O I
10.1016/j.bios.2011.12.011
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
We report an aptasensor for biosensing of Ochratoxin A (OTA) using aptamer-DNAzyme hairpin as biorecognition element. The structure of this engineered nucleic acid includes the horseradish peroxidase (HRP)-mimicking DNAzyme and the OTA specific aptamer sequences. A blocking tail captures a part of these sequences in the stem region of the hairpin. In the presence of OTA, the hairpin is opened due to the formation of the aptamer-analyte complex. As a result, self-assembly of the active HRP-mimicking DNAzyme occurs. The activity of this DNAzyme is linearly correlated with OTA concentration up to 10 nM, showing a limit of detection of 2.5 nM. (C) 2011 Elsevier B.V. All rights reserved.
引用
收藏
页码:208 / 212
页数:5
相关论文
共 30 条
[1]  
[Anonymous], 2003, 5009962003 GBT
[2]   Enzyme-Linked Aptamer Assays (ELAAs), based on a competition format for a rapid and sensitive detection of Ochratoxin A in wine [J].
Barthelmebs, Lise ;
Jonca, Justyna ;
Hayat, Akhtar ;
Prieto-Simon, Beatriz ;
Marty, Jean-Louis .
FOOD CONTROL, 2011, 22 (05) :737-743
[3]   SELECTION OF SINGLE-STRANDED-DNA MOLECULES THAT BIND AND INHIBIT HUMAN THROMBIN [J].
BOCK, LC ;
GRIFFIN, LC ;
LATHAM, JA ;
VERMAAS, EH ;
TOOLE, JJ .
NATURE, 1992, 355 (6360) :564-566
[4]   An electrochemical competitive biosensor for ochratoxin A based on a DNA biotinylated aptamer [J].
Bonel, Laura ;
Vidal, Juan C. ;
Duato, Patricia ;
Castillo, Juan R. .
BIOSENSORS & BIOELECTRONICS, 2011, 26 (07) :3254-3259
[5]   General Peroxidase Activity of G-Quadruplex-Hemin Complexes and Its Application in Ligand Screening [J].
Cheng, Xiaohong ;
Liu, Xiangjun ;
Bing, Tao ;
Cao, Zehui ;
Shangguan, Dihua .
BIOCHEMISTRY, 2009, 48 (33) :7817-7823
[6]   DEVELOPMENT OF A QUANTITATIVE AND SENSITIVE ENZYME-LINKED-IMMUNOSORBENT-ASSAY FOR OCHRATOXIN-A USING ANTIBODIES FROM THE YOLK OF THE LAYING HEN [J].
CLARKE, JR ;
MARQUARDT, RR ;
OOSTERVELD, A ;
FROHLICH, AA ;
MADRID, FJ ;
DAWOOD, M .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 1993, 41 (10) :1784-1789
[7]   Fluorescence Polarization Based Displacement Assay for the Determination of Small Molecules with Aptamers [J].
Cruz-Aguado, Jorge A. ;
Penner, Gregory .
ANALYTICAL CHEMISTRY, 2008, 80 (22) :8853-8855
[8]   Determination of Ochratoxin A with a DNA Aptamer [J].
Cruz-Aguado, Jorge A. ;
Penner, Gregory .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2008, 56 (22) :10456-10461
[9]   INVITRO SELECTION OF RNA MOLECULES THAT BIND SPECIFIC LIGANDS [J].
ELLINGTON, AD ;
SZOSTAK, JW .
NATURE, 1990, 346 (6287) :818-822
[10]  
Hardin CC, 2001, BIOPOLYMERS, V56, P147, DOI 10.1002/1097-0282(2000/2001)56:3<147::AID-BIP10011>3.0.CO