Effect of cholesterol on the properties of phospholipid membranes.: 4.: Interatomic voids

被引:31
作者
Alinchenko, MG
Voloshin, VP
Medvedev, NN
Mezei, M
Pártay, L
Jedlovszky, P
机构
[1] Eotvos Lorand Univ, Dept Colloid Chem, H-1117 Budapest, Hungary
[2] RAS, Siberian Branch, Inst Chem Kinet & Combust, Grp Supramol Struct, R-630090 Novosibirsk, Russia
[3] NYU, Mt Sinai Sch Med, Dept Physiol & Biophys, New York, NY 10029 USA
关键词
D O I
10.1021/jp051832s
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The properties of the interatomic voids present in fully hydrated dimyristoylphosphatidyleholine (DMPC)cholesterol mixed membranes of different compositions are analyzed in detail using it generalized variant of the Voronoi-Delaunay method on the basis of computer simulation results. The systems investigated are chosen from both sides of the DMPC-cholesterol miscibility gap the pure DMPC bilayer has also been included in the analysis as a reference system. The results obtained show that the empty space is organized in a more compact way, forming larger voids in the presence than in the absence of cholesterol. The voids located in the region of the rigid cholesterol rings become. on average, less spherical, oriented more parallel with the membrane normal axis with increasing cholesterol concentration, whereas an opposite effect of cholesterol is observed in the middle of the membrane among the chain terminal methyl groups, In general, the preferential orientation of the voids is found to strongly correlate With that of the molecules in the hydrocarbon phase of the membranes. The membranes are found to contain rather large voids. the volume of which can be an order of magnitude larger than the largest spherical cavities present in the systems, These voids are elongated or branching channels rather than big empty holes, The voids located among the DMPC and cholesterol molecules are lying preferably parallel with the membrane normal axis, The existence of such empty channels can be of great importance in the cross-membrane permeation of small, uncharged penetrants, in particular, of polar molecules.
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页码:16490 / 16502
页数:13
相关论文
共 87 条
[1]   Morphology of voids in molecular systems. A Voronoi-Delaunay analysis of a simulated DMPC membrane [J].
Alinchenko, MG ;
Anikeenko, AV ;
Medvedev, NN ;
Voloshin, VP ;
Mezei, M ;
Jedlovszky, P .
JOURNAL OF PHYSICAL CHEMISTRY B, 2004, 108 (49) :19056-19067
[2]  
Anikeenko AV, 2004, LECT NOTES COMPUT SC, V3045, P217
[3]   3-DIMENSIONAL APOLLONIAN PACKING AS A MODEL FOR DENSE GRANULAR SYSTEMS [J].
ANISHCHIK, SV ;
MEDVEDEV, NN .
PHYSICAL REVIEW LETTERS, 1995, 75 (23) :4314-4317
[4]   STATISTICAL GEOMETRY OF MOLTEN ALKALI-HALIDES [J].
BARANYAI, A ;
RUFF, I .
JOURNAL OF CHEMICAL PHYSICS, 1986, 85 (01) :365-373
[6]   Voronoi polyhedra and Delaunay simplexes in the structural analysis of molecular-dynamics-simulated materials [J].
Brostow, W ;
Chybicki, M ;
Laskowski, R ;
Rybicki, J .
PHYSICAL REVIEW B, 1998, 57 (21) :13448-13458
[7]   PREDICTION OF RELATIVE PERMEABILITY IN SIMPLE POROUS-MEDIA [J].
BRYANT, S ;
BLUNT, M .
PHYSICAL REVIEW A, 1992, 46 (04) :2004-2011
[8]   Combined Monte Carlo and molecular dynamics simulation of hydrated dipalmitoyl-phosphatidylcholine-cholesterol lipid bilayers [J].
Chiu, SW ;
Jakobsson, E ;
Scott, HL .
JOURNAL OF CHEMICAL PHYSICS, 2001, 114 (12) :5435-5443
[9]   Cholesterol-induced modifications in lipid bilayers: A simulation study [J].
Chiu, SW ;
Jakobsson, E ;
Mashl, RJ ;
Scott, HL .
BIOPHYSICAL JOURNAL, 2002, 83 (04) :1842-1853
[10]  
DELAUNAY BN, 1928, P INT MATH C TOR 192, P695