Microarrays in the 2010s: the contribution of microarray-based gene expression profiling to breast cancer classification, prognostication and prediction

被引:82
作者
Colombo, Pierre-Emmanuel [2 ]
Milanezi, Fernanda [2 ]
Weigelt, Britta [1 ]
Reis-Filho, Jorge S. [2 ]
机构
[1] Canc Res UK London Res Inst, Signal Transduct Lab, London WC2A 3LY, England
[2] Inst Canc Res, Breakthrough Breast Canc Res Ctr, Mol Pathol Team, London SW3 6JB, England
来源
BREAST CANCER RESEARCH | 2011年 / 13卷 / 03期
关键词
MOLECULAR SUBTYPES; PREOPERATIVE CHEMOTHERAPY; NEOADJUVANT PACLITAXEL; GRADE INDEX; CYCLOPHOSPHAMIDE CHEMOTHERAPY; RETROSPECTIVE ANALYSIS; INTRINSIC SUBTYPES; GENOMIC SIGNATURES; RECURRENCE SCORE; CLINICAL-TRIALS;
D O I
10.1186/bcr2890
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Breast cancer comprises a collection of diseases with distinctive clinical, histopathological, and molecular features. Importantly, tumors with similar histological features may display disparate clinical behaviors. Gene expression profiling using microarray technologies has improved our understanding of breast cancer biology and has led to the development of a breast cancer molecular taxonomy and of multigene 'signatures' to predict outcome and response to systemic therapies. The use of these prognostic and predictive signatures in routine clinical decision-making remains controversial. Here, we review the clinical relevance of microarray-based profiling of breast cancer and discuss its impact on patient management.
引用
收藏
页数:15
相关论文
共 114 条
[1]   Prognostic and predictive value of the 21-gene recurrence score assay in postmenopausal women with node-positive, oestrogen-receptor-positive breast cancer on chemotherapy: a retrospective analysis of a randomised trial [J].
Albain, Kathy S. ;
Barlow, William E. ;
Shak, Steven ;
Hortobagyi, Gabriel N. ;
Livingston, Robert B. ;
Yeh, I-Tien ;
Ravdin, Peter ;
Bugarini, Roberto ;
Boehner, Frederick L. ;
Davidson, Nancy E. ;
Sledge, George W. ;
Winer, Eric P. ;
Hudis, Clifford ;
Ingle, James N. ;
Perez, Edith A. ;
Pritchard, Kathleen I. ;
Shepherd, Lois ;
Gralow, Julie R. ;
Yoshizawa, Carl ;
Allred, D. Craig ;
Osborne, C. Kent ;
Hayes, Daniel F. .
LANCET ONCOLOGY, 2010, 11 (01) :55-65
[2]   Use of 70-gene signature to predict prognosis of patients with node-negative breast cancer: a prospective community-based feasibility study (RASTER) [J].
不详 .
LANCET ONCOLOGY, 2007, 8 (12) :1079-1087
[3]   Genetic Interactions in Cancer Progression and Treatment [J].
Ashworth, Alan ;
Lord, Christopher J. ;
Reis-Filho, Jorge S. .
CELL, 2011, 145 (01) :30-38
[4]   Gene expression profiles predict complete pathologic response to neoadjuvant paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide chemotherapy in breast cancer [J].
Ayers, M ;
Symmans, WF ;
Stec, J ;
Damokosh, AI ;
Clark, E ;
Hess, K ;
Lecocke, M ;
Metivier, J ;
Booser, D ;
Ibrahim, N ;
Valero, V ;
Royce, M ;
Arun, B ;
Whitman, G ;
Ross, J ;
Sneige, N ;
Hortobagyi, GN ;
Pusztai, L .
JOURNAL OF CLINICAL ONCOLOGY, 2004, 22 (12) :2284-2293
[5]   Run batch effects potentially compromise the usefulness of genomic signatures for ovarian cancer [J].
Baggerly, Keith A. ;
Coombes, Kevin R. ;
Neeley, E. Shannon .
JOURNAL OF CLINICAL ONCOLOGY, 2008, 26 (07) :1186-1187
[6]   Molecular apocrine differentiation is a common feature of breast cancer in patients with germline PTEN mutations [J].
Banneau, Guillaume ;
Guedj, Mickael ;
MacGrogan, Gaetan ;
de Mascarel, Isabelle ;
Velasco, Valerie ;
Schiappa, Renaud ;
Bonadona, Valerie ;
David, Albert ;
Dugast, Catherine ;
Gilbert-Dussardier, Brigitte ;
Ingster, Olivier ;
Vabres, Pierre ;
Caux, Frederic ;
de Reynies, Aurelien ;
Iggo, Richard ;
Sevenet, Nicolas ;
Bonnet, Francoise ;
Longy, Michel .
BREAST CANCER RESEARCH, 2010, 12 (04)
[7]   Identification of Markers of Taxane Sensitivity Using Proteomic and Genomic Analyses of Breast Tumors from Patients Receiving Neoadjuvant Paclitaxel and Radiation [J].
Bauer, Joshua A. ;
Chakravarthy, A. Bapsi ;
Rosenbluth, Jennifer M. ;
Mi, Deming ;
Seeley, Erin H. ;
Granja-Ingram, Nara De Matos ;
Olivares, Maria G. ;
Kelley, Mark C. ;
Mayer, Ingrid A. ;
Meszoely, Ingrid M. ;
Means-Powell, Julie A. ;
Johnson, Kimberly N. ;
Tsai, Chiaojung Jillian ;
Ayers, Gregory D. ;
Sanders, Melinda E. ;
Schneider, Robert J. ;
Formenti, Silvia C. ;
Caprioli, Richard M. ;
Pietenpol, Jennifer A. .
CLINICAL CANCER RESEARCH, 2010, 16 (02) :681-690
[8]   Extracellular matrix signature identifies breast cancer subgroups with different clinical outcome [J].
Bergamaschi, A. ;
Tagliabue, E. ;
Sorlie, T. ;
Naurne, B. ;
Triulzi, T. ;
Orlandi, R. ;
Russnes, H. G. ;
Nesland, J. M. ;
Tammi, R. ;
Auvinen, P. ;
Kosma, V-M ;
Menard, S. ;
Borresen-Dale, A-L .
JOURNAL OF PATHOLOGY, 2008, 214 (03) :357-367
[10]   Do predictive signatures really predict response to cancer chemotherapy? [J].
Borst, Piet ;
Wessels, Lodewyk .
CELL CYCLE, 2010, 9 (24) :4836-4840