Topological bias and inconsistency of maximum likelihood using wrong models

被引：91

作者：

Bruno, WJ

Halpern, AL

机构：

[1] Univ Calif Los Alamos Natl Lab, Los Alamos, NM 87545 USA

[2] Univ New Mexico, Hlth Sci Ctr, Dept Mol Genet & Microbiol, Albuquerque, NM 87131 USA

来源：

MOLECULAR BIOLOGY AND EVOLUTION | 1999年 / 16卷 / 04期

关键词：

long branches attract; most likely unresolved tree; positively misleading;

D O I：

10.1093/oxfordjournals.molbev.a026137

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

引用

收藏

页码：564 / 566

页数：3

相关论文

共 8 条

[1] BULMER M, 1991, MOL BIOL EVOL, V8, P868
[2] CASES IN WHICH PARSIMONY OR COMPATIBILITY METHODS WILL BE POSITIVELY MISLEADING
FELSENSTEIN, J
[J]. SYSTEMATIC ZOOLOGY, 1978, 27 (04): : 401 - 410
[3] ESTIMATION OF AVERAGE NUMBER OF NUCLEOTIDE SUBSTITUTIONS WHEN THE RATE OF SUBSTITUTION VARIES WITH NUCLEOTIDE
GOJOBORI, T
ISHII, K
NEI, M
[J]. JOURNAL OF MOLECULAR EVOLUTION, 1982, 18 (06) : 414 - 423
[4] Huelsenbeck JP, 1996, EVOLUTION, V50, P1418, DOI 10.1111/j.1558-5646.1996.tb03915.x
[5] SUCCESS OF PHYLOGENETIC METHODS IN THE 4-TAXON CASE
HUELSENBECK, JP
HILLIS, DM
[J]. SYSTEMATIC BIOLOGY, 1993, 42 (03) : 247 - 264
[6] Efficiencies of different genes and different tree-building methods in recovering a known vertebrate phylogeny
Russo, CAM
Takezaki, N
Nei, M
[J]. MOLECULAR BIOLOGY AND EVOLUTION, 1996, 13 (03) : 525 - 536
[7] Estimating the rate of evolution of the rate of molecular evolution
Thorne, JL
Kishino, H
Painter, IS
[J]. MOLECULAR BIOLOGY AND EVOLUTION, 1998, 15 (12) : 1647 - 1657
[8] How often do wrong models produce better phylogenies?
Yang, ZH
[J]. MOLECULAR BIOLOGY AND EVOLUTION, 1997, 14 (01) : 105 - 108