Sequence analysis and biochemical characterization of the nostopeptolide A biosynthetic gene cluster from Nostoc sp GSV224

被引:88
作者
Hoffmann, D
Hevel, JM
Moore, RE
Moore, BS [1 ]
机构
[1] Univ Hawaii Manoa, Dept Chem, Honolulu, HI 96822 USA
[2] Univ Arizona, Coll Pharm, Div Med Chem, Tucson, AZ 85721 USA
基金
美国国家科学基金会;
关键词
non-ribosomal peptide synthetase; polyketide synthase; 4-methylproline; cyanobacteria; cyclic peptide;
D O I
10.1016/S0378-1119(03)00587-0
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The cloning. sequencing, annotation and biochemical analysis of the nostopeptolide (nos) biosynthetic gene cluster from the terrestrial cyanobacterium Nostoc sp. GSV224 is described. Nostopeptolides A1 and A2 are cyclic peptide-polyketide hybrid natural products possessing nine amino acid residues, a butyric acid group, and an internal acetate-derived unit that are linked by peptide and ester bonds. The nos gene cluster includes eight ORFs encompassing 40 kb and includes most of the genes predicted to be involved in the biosynthesis and transport of this group of nonapeptolides. The genetic architecture and domain organization of the nos synthetase, a mixed non-ribosomal peptide synthetase-polyketide synthase, is co-linear in arrangement with respect to the putative order of the biosynthetic assembly of the lipopeptolide. Biochemical analysis of the NosA1, NosC1 and NosD1 adenylation domains coupled with the recent characterization of the nosE and nosF gene products, which are involved in the biosynthesis of the rare non-proteinogenic amino acid residue (L)-4-methylproline from L-leucine. support the involvement of this gene cluster in nostopeptolide biosynthesis. (C) 2003 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:171 / 180
页数:10
相关论文
共 37 条
[1]  
BECKER JE, 2002, THESIS U HAWAII HONO, P53
[2]   Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2) [J].
Bentley, SD ;
Chater, KF ;
Cerdeño-Tárraga, AM ;
Challis, GL ;
Thomson, NR ;
James, KD ;
Harris, DE ;
Quail, MA ;
Kieser, H ;
Harper, D ;
Bateman, A ;
Brown, S ;
Chandra, G ;
Chen, CW ;
Collins, M ;
Cronin, A ;
Fraser, A ;
Goble, A ;
Hidalgo, J ;
Hornsby, T ;
Howarth, S ;
Huang, CH ;
Kieser, T ;
Larke, L ;
Murphy, L ;
Oliver, K ;
O'Neil, S ;
Rabbinowitsch, E ;
Rajandream, MA ;
Rutherford, K ;
Rutter, S ;
Seeger, K ;
Saunders, D ;
Sharp, S ;
Squares, R ;
Squares, S ;
Taylor, K ;
Warren, T ;
Wietzorrek, A ;
Woodward, J ;
Barrell, BG ;
Parkhill, J ;
Hopwood, DA .
NATURE, 2002, 417 (6885) :141-147
[3]  
BRADFORD MM, 1976, ANAL BIOCHEM, V72, P248, DOI 10.1016/0003-2697(76)90527-3
[4]   Marine cyanobacteria - a prolific source of natural products [J].
Burja, AM ;
Banaigs, B ;
Abou-Mansour, E ;
Burgess, JG ;
Wright, PC .
TETRAHEDRON, 2001, 57 (46) :9347-9377
[5]   Predictive, structure-based model of amino acid recognition by nonribosomal peptide synthetase adenylation domains [J].
Challis, GL ;
Ravel, J ;
Townsend, CA .
CHEMISTRY & BIOLOGY, 2000, 7 (03) :211-224
[6]   The barbamide biosynthetic gene cluster: a novel marine cyanobacterial system of mixed polyketide synthase (PKS)-non-ribosomal peptide synthetase (NRPS) origin involving an unusual trichloroleucyl starter unit [J].
Chang, ZX ;
Flatt, P ;
Gerwick, WH ;
Nguyen, VA ;
Willis, CL ;
Sherman, DH .
GENE, 2002, 296 (1-2) :235-247
[7]   Microcystin biosynthesis in Planktothrix:: Genes, evolution, and manipulation [J].
Christiansen, G ;
Fastner, J ;
Erhard, M ;
Börner, T ;
Dittmann, E .
JOURNAL OF BACTERIOLOGY, 2003, 185 (02) :564-572
[8]   SEQUENCE AND ANALYSIS OF THE GENETIC-LOCUS RESPONSIBLE FOR SURFACTIN SYNTHESIS IN BACILLUS-SUBTILIS [J].
COSMINA, P ;
RODRIGUEZ, F ;
DEFERRA, F ;
GRANDI, G ;
PEREGO, M ;
VENEMA, G ;
VANSINDEREN, D .
MOLECULAR MICROBIOLOGY, 1993, 8 (05) :821-831
[9]  
Dittmann E, 2001, APPL MICROBIOL BIOT, V57, P467
[10]   The biosynthetic gene cluster for the antitumor drug bleomycin from Streptomyces verticillus ATCC15003 supporting functional interactions between nonribosomal peptide synthetases and a polyketide synthase [J].
Du, LC ;
Sánchez, C ;
Chen, M ;
Edwards, DJ ;
Shen, B .
CHEMISTRY & BIOLOGY, 2000, 7 (08) :623-642