Crystal packing in two pH-dependent crystal forms of rhamnogalacturonan acetylesterase

被引:8
作者
Molgaard, A
Larsen, S
机构
[1] Univ Copenhagen, Ctr Crystallog Studies, DK-2100 Copenhagen, Denmark
[2] Tech Univ Denmark, Ctr Biol Sequence Anal, Biocentrum DTU, DK-2800 Lyngby, Denmark
[3] European Synchrotron Radiat Facil, F-38043 Grenoble, France
来源
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 2004年 / 60卷
关键词
D O I
10.1107/S0907444903029767
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The glycoprotein rhamnogalacturonan acetylesterase from Aspergillus aculeatus has been crystallized in two crystal forms, an orthorhombic and a trigonal crystal form. In the orthorhombic crystal form, the covalently bound carbohydrate at one of the two N-glycosylation sites is involved in crystal contacts. The orthorhombic crystal form was obtained at pH 5.0 and the trigonal crystal form at pH 4.5. In one case, the two crystal forms were found in the same drop at pH 4.7. The differences in crystal packing in the two crystal forms can be explained by the pH-dependent variation in the protonation state of the glutamic acid residues on the protein surface.
引用
收藏
页码:472 / 478
页数:7
相关论文
共 28 条
[1]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]   FREE R-VALUE - A NOVEL STATISTICAL QUANTITY FOR ASSESSING THE ACCURACY OF CRYSTAL-STRUCTURES [J].
BRUNGER, AT .
NATURE, 1992, 355 (6359) :472-475
[3]  
BRUNGER AT, 1992, XPLOR VERSION 3 1 SY
[4]   Crystal contacts engineering of aspartyl-tRNA synthetase from Thermus thermophilus:: effects on crystallizability [J].
Charron, C ;
Kern, D ;
Giegé, R .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2002, 58 :1729-1733
[5]   PROTEIN-PROTEIN RECOGNITION ANALYZED BY DOCKING SIMULATION [J].
CHERFILS, J ;
DUQUERROY, S ;
JANIN, J .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1991, 11 (04) :271-280
[6]   CRYSTAL PACKING IN 6 CRYSTAL FORMS OF PANCREATIC RIBONUCLEASE [J].
CROSIO, MP ;
JANIN, J ;
JULLIEN, M .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 228 (01) :243-251
[7]   ACCURATE BOND AND ANGLE PARAMETERS FOR X-RAY PROTEIN-STRUCTURE REFINEMENT [J].
ENGH, RA ;
HUBER, R .
ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 :392-400
[8]  
GEWIRTH D, 1994, HKL MANUAL OSCILLATI
[9]   RAPID CRYSTALLIZATION OF T4 LYSOZYME BY INTERMOLECULAR DISULFIDE CROSS-LINKING [J].
HEINZ, DW ;
MATTHEWS, BW .
PROTEIN ENGINEERING, 1994, 7 (03) :301-307
[10]   A CLASSIFICATION OF GLYCOSYL HYDROLASES BASED ON AMINO-ACID-SEQUENCE SIMILARITIES [J].
HENRISSAT, B .
BIOCHEMICAL JOURNAL, 1991, 280 :309-316