Reduced spectral density mapping for proteins:: Validity for studies of 13C relaxation

被引:11
作者
Atkinson, RA [1 ]
Lefèvre, JF [1 ]
机构
[1] Ecole Super Biotechnol Strasbourg, CNRS, UPR 9003, F-67400 Illkirch Graffenstaden, France
关键词
(13)C; dynamics; protein; relaxation; spectral density;
D O I
10.1023/A:1008323420405
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Spectral density mapping provides direct access to protein dynamics with no assumptions as to the nature of the molecule or its dynamic behaviour. Reduced spectral density mapping characterises a protein's motions at a lower experimental burden, assuming that the spectral density function J(omega) is flat around omega(H). This introduces little error for (15)N relaxation data but is less valid for (13)C studies, perturbing J(omega(C)) considerably to an extent that depends on the nature of the molecule's motions. We propose the fitting of spectral density at high frequencies to a single Lorentzian and show that the true values of the spectral density lie between those determined by the two approximations.
引用
收藏
页码:83 / 88
页数:6
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