DNA minor groove accessibility in the nucleosome core deduced from specific interactions with DAPI

被引:6
作者
Caneva, R
Rossetti, L
Savino, M
机构
[1] IST PASTEUR,FDN CENCI BOLOGNETTI,CNR,CTR STUDIO ACID NUCLEICI,I-00185 ROME,ITALY
[2] UNIV ROMA 1,CNR,CTR STUDIO ACIDI NUCLEICI,I-00185 ROME,ITALY
来源
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION | 1996年 / 1306卷 / 2-3期
关键词
nucleosome; 4'; 6-diamidino-2-phenylindole; gene expression; DNA; 4'; 6-DIAMIDINO-2-PHENYLINDOLE DAPI; BINDING MODES; ETHIDIUM;
D O I
10.1016/0167-4781(96)00015-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Equilibrium binding properties of DAPI for purified nucleosome cores were derived from fluorescence intensity enhancement. Both the affinity and the number of sites of the primary, minor groove binding are preserved with respect to the corresponding isolated DNA, suggesting that the capacity for specific interactions of the minor groove may well be exerted in chromatin.
引用
收藏
页码:117 / 121
页数:5
相关论文
共 25 条
[1]  
Bellamy A.R., 1968, METHODS ENZYMOL, V12, P156, DOI [10.1016/0076-6879(67)12125-3, DOI 10.1016/0076-6879(67)12125-3]
[2]   SELECTIVE BINDING OF ACTINOMYCIN-D INDUCES A REVERSIBLE CONFORMATIONAL TRANSITION OF NUCLEOSOMES [J].
CACCHIONE, S ;
CANEVA, R ;
SAVINO, M .
BIOCHIMICA ET BIOPHYSICA ACTA, 1986, 867 (04) :229-233
[3]  
CANTOR CR, 1980, BIOPHYSICAL CHEM 3, P856
[4]   THE PECULIAR BINDING-PROPERTIES OF 4'-DEOXY,4'-IODODOXORUBICIN TO ISOLATED DNA AND 175-BP NUCLEOSOMES [J].
CERA, C ;
PALUMBO, M .
NUCLEIC ACIDS RESEARCH, 1991, 19 (20) :5707-5711
[5]   INTERACTION BETWEEN 2ND GENERATION ANTHRACYCLINES AND DNA IN THE NUCLEOSOMAL STRUCTURE [J].
CERA, C ;
PALU, G ;
MAGNO, SM ;
PALUMBO, M .
NUCLEIC ACIDS RESEARCH, 1991, 19 (09) :2309-2314
[6]   BINDING OF DAUNOMYCIN TO CALF THYMUS NUCLEOSOMES [J].
CHAIRES, JB ;
DATTAGUPTA, N ;
CROTHERS, DM .
BIOCHEMISTRY, 1983, 22 (02) :284-292
[7]   SPECTROSCOPIC ANALYSIS OF DRUG NUCLEIC-ACID INTERACTIONS [J].
DOUGHERTY, G ;
PIGRAM, WJ .
CRC CRITICAL REVIEWS IN BIOCHEMISTRY, 1982, 12 (02) :103-132
[8]   DNA BENDING AND ITS RELATION TO NUCLEOSOME POSITIONING [J].
DREW, HR ;
TRAVERS, AA .
JOURNAL OF MOLECULAR BIOLOGY, 1985, 186 (04) :773-790
[9]   BINDING OF 4',6-DIAMIDINO-2-PHENYLINDOLE (DAPI) TO AT REGIONS OF DNA - EVIDENCE FOR AN ALLOSTERIC CONFORMATIONAL CHANGE [J].
ERIKSSON, S ;
KIM, SK ;
KUBISTA, M ;
NORDEN, B .
BIOCHEMISTRY, 1993, 32 (12) :2987-2998
[10]   FLUORESCENT COMPLEXES OF DNA WITH DAPI 4',6-DIAMIDINE-2-PHENYL INDOLE.2HCL OR DCI 4',6-DICARBOXYAMIDE-2-PHENYL INDOLE [J].
KAPUSCINSKI, J ;
SKOCZYLAS, B .
NUCLEIC ACIDS RESEARCH, 1978, 5 (10) :3775-3799