Assessment of genetic diversity in sesame (Sesamum indicum L.) detected by Amplified Fragment Length Polymorphism markers

被引:41
作者
Ali, Ghulam M.
Yasumoto, Sirato
Seki-Katsuta, Masumi
机构
[1] Natl Agr Res Ctr, Agr Biotechnol Program, Islamabad, Pakistan
[2] Natl Agr Res Organizat, Natl Inst Crop Sci, Lab New Crops Breeding, Tsukuba, Ibaraki 3058666, Japan
来源
ELECTRONIC JOURNAL OF BIOTECHNOLOGY | 2007年 / 10卷 / 01期
关键词
AFLP; genetic diversity; geographical origin; morphology; sesame;
D O I
10.2225/vol10-issue1-fulltext-16
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Sesame (Sesamum indicum L.) is one of the oldest oil crops and is widely cultivated in Asia and Africa. To determine the level of genetic diversity in relation to geographical origins and morphological characteristics, a total of 96 accessions have been collected from different parts of the world and were analyzed using AFLP techniques. Twenty-one primer pairs generated a total of 445 bands and among them 157 (35%) were polymorphic. Using UPGMA clustering analysis method based on the similarity coefficient, accessions were separated into two major groups. The first group mostly consists of Eastern Asian origin and another group consists of South Asian origin. Sub- clusters separated the accessions and form distinct diversity among groups. Considering the relatednessof accessions, geographical origin and their morphological characteristics are reflected to the similarity of AFLP pattern.
引用
收藏
页码:12 / 23
页数:12
相关论文
共 31 条
[1]   Using amplified fragment-length polymorphisms (AFLPs) to identify peach cultivars [J].
Aranzana, MJ ;
Carbó, J ;
Arús, P .
JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE, 2003, 128 (05) :672-677
[2]   Sesamin, a sesame lignan, is a potent inducer of hepatic fatty acid oxidation in the rat [J].
Ashakumary, L ;
Rouyer, I ;
Takahashi, Y ;
Ide, T ;
Fukuda, N ;
Aoyama, T ;
Hashimoto, T ;
Mizugaki, M ;
Sugano, M .
METABOLISM-CLINICAL AND EXPERIMENTAL, 1999, 48 (10) :1303-1313
[3]   Genetic diversity within Pisum sativum using protein- and PCR-based markers [J].
Baranger, A ;
Aubert, G ;
Arnau, G ;
Lainé, AL ;
Deniot, G ;
Potier, J ;
Weinachter, C ;
Lejeune-Hénaut, I ;
Lallemand, J ;
Burstin, J .
THEORETICAL AND APPLIED GENETICS, 2004, 108 (07) :1309-1321
[4]   SESAMIN, SESAMOLIN AND THE ORIGIN OF SESAME [J].
BEDIGIAN, D ;
SEIGLER, DS ;
HARLAN, JR .
BIOCHEMICAL SYSTEMATICS AND ECOLOGY, 1985, 13 (02) :133-139
[5]   PATTERNS OF MORPHOLOGICAL VARIATION IN SESAMUM-INDICUM [J].
BEDIGIAN, D ;
SMYTH, CA ;
HARLAN, JR .
ECONOMIC BOTANY, 1986, 40 (03) :353-365
[7]   Study of genetic diversity in Indian and exotic sesame (Sesamum indicum L.) germplasm using random amplified polymorphic DNA (RAPD) markers [J].
Bhat K.V. ;
Babrekar P.P. ;
Lakhanpaul S. .
Euphytica, 1999, 110 (1) :21-33
[8]   Diversity in Indian sesame collection and stratification of germplasm accessions in different diversity groups [J].
Bisht, IS ;
Mahajan, RK ;
Loknathan, TR ;
Agrawal, RC .
GENETIC RESOURCES AND CROP EVOLUTION, 1998, 45 (04) :325-335
[9]  
BRAR GS, 1982, INDIAN J AGR SCI, V52, P434
[10]   Integrated map of AFLP, SSLP and RFLP markers using a recombinant inbred population of rice (Oryza sativa L.) [J].
Cho, YG ;
McCouch, SR ;
Kuiper, M ;
Kang, MR ;
Pot, J ;
Groenen, JTM ;
Eun, MY .
THEORETICAL AND APPLIED GENETICS, 1998, 97 (03) :370-380