Characterization of human cd200 glycoprotein receptor gene located on chromosome 3q12-13

被引:30
作者
Vieites, JM
de la Torre, R
Ortega, MA
Montero, T
Peco, JM
Sánchez-Pozo, A
Gil, A
Suárez, A [1 ]
机构
[1] Univ Granada, Dept Biochem & Mol Biol, E-18071 Granada, Spain
[2] Univ Granada, Dept Legal Med Toxicol & Psychiat, Granada 18071, Spain
关键词
gene structure; expression; Ig superfamily; alternative splicing;
D O I
10.1016/S0378-1119(03)00562-6
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
An immunomodulatory membrane protein, CD200R displays an expression pattern restricted to myeloid cells in mice. It is the receptor for a ligand, CD200, expressed by a broad range of cell types. In this study, we describe the cloning and characterization of the human homologue of the CD200R gene. This gene maps closely to the CD200 gene on human chromosome 3q12-13. The human CD200R gene spans a region of 52 kb, consists of nine exons, and encodes a 348-amino-acid cell-surface protein consisting of two IgFF domains in a typical V/C2 arrangement. The 59-amino-acid cytoplasmic domain has two tyrosine residues, one of which is contained within a NPXY motif. In common with other IgSF genes, the CD200R gene can generate different protein isoforms through alternative splicing. An alternative spliceout form, which has not yet been described in mice, encodes a 188-amino-acid truncated soluble polypeptide containing only the V immunoglobulin domain. In contrast to murine CD200R protein, the human membrane-bound and soluble CD200R proteins have an insertion of 23 amino acids at position 23, encoded by exon 2, which generates a putative dihydroxyacid dehydratase domain. The splicing of exon 2 generates two new isoforms, encoding the membrane and soluble proteins but lacking the dyhydroxyacid dehydratase domain. Northern-blot analysis shows that both membrane-bound and soluble isoforms are expressed in the thymus, liver, spleen and placenta. By RT-PCR. we have analyzed the expression of the four transcript variants in human placenta, spleen, liver, brain and kidney. (C) 2003 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:99 / 104
页数:6
相关论文
共 16 条
[11]   GeneMachine: gene prediction and sequence annotation [J].
Makalowska, I ;
Ryan, JF ;
Baxevanis, AD .
BIOINFORMATICS, 2001, 17 (09) :843-844
[12]   A physical map of the human genome [J].
McPherson, JD ;
Marra, M ;
Hillier, L ;
Waterston, RH ;
Chinwalla, A ;
Wallis, J ;
Sekhon, M ;
Wylie, K ;
Mardis, ER ;
Wilson, RK ;
Fulton, R ;
Kucaba, TA ;
Wagner-McPherson, C ;
Barbazuk, WB ;
Gregory, SG ;
Humphray, SJ ;
French, L ;
Evans, RS ;
Bethel, G ;
Whittaker, A ;
Holden, JL ;
McCann, OT ;
Dunham, A ;
Soderlund, C ;
Scott, CE ;
Bentley, DR ;
Schuler, G ;
Chen, HC ;
Jang, WH ;
Green, ED ;
Idol, JR ;
Maduro, VVB ;
Montgomery, KT ;
Lee, E ;
Miller, A ;
Emerling, S ;
Kucherlapati, R ;
Gibbs, R ;
Scherer, S ;
Gorrell, JH ;
Sodergren, E ;
Clerc-Blankenburg, K ;
Tabor, P ;
Naylor, S ;
Garcia, D ;
de Jong, PJ ;
Catanese, JJ ;
Nowak, N ;
Osoegawa, K ;
Qin, SZ .
NATURE, 2001, 409 (6822) :934-941
[13]   A CATALOG OF SPLICE JUNCTION SEQUENCES [J].
MOUNT, SM .
NUCLEIC ACIDS RESEARCH, 1982, 10 (02) :459-472
[14]   Detection of a soluble form of the leukocyte surface antigen CD48 in plasma and its elevation in patients with lymphoid leukemias and arthritis [J].
Smith, GM ;
Biggs, J ;
Norris, B ;
AndersonStewart, P ;
Ward, R .
JOURNAL OF CLINICAL IMMUNOLOGY, 1997, 17 (06) :502-509
[15]   CLUSTAL-W - IMPROVING THE SENSITIVITY OF PROGRESSIVE MULTIPLE SEQUENCE ALIGNMENT THROUGH SEQUENCE WEIGHTING, POSITION-SPECIFIC GAP PENALTIES AND WEIGHT MATRIX CHOICE [J].
THOMPSON, JD ;
HIGGINS, DG ;
GIBSON, TJ .
NUCLEIC ACIDS RESEARCH, 1994, 22 (22) :4673-4680
[16]  
Wright AC, 2000, NATO SCI SER II MATH, V2, P1