Inter-model consistency and complementarity: Learning from ex-vivo imaging and electrophysiological data towards an integrated understanding of cardiac physiology

被引:33
作者
Camara, O. [1 ,2 ]
Sermesant, M. [3 ,4 ]
Lamata, P. [4 ,5 ]
Wang, L. [6 ]
Pop, M. [7 ]
Relan, J. [3 ]
De Craene, M. [1 ,2 ]
Delingette, H.
Liu, H. [6 ,8 ]
Niederer, S. [4 ]
Pashaei, A. [1 ,2 ]
Plank, G. [9 ]
Romero, D. [1 ,2 ]
Sebastian, R. [10 ]
Wong, K. C. L. [3 ]
Zhang, H. [11 ]
Ayache, N. [3 ]
Frangi, A. F. [1 ,2 ]
Shi, P. [6 ]
Smith, N. P. [4 ,5 ]
Wright, G. A. [7 ]
机构
[1] Univ Pompeu Fabra, Ctr Computat Imaging & Simulat Technol Biomed CIS, Barcelona, Spain
[2] Networking Biomed Res Ctr Bioengn Biomat & Nanome, Barcelona, Spain
[3] Asclepios Project, INRIA, Sophia Antipolis, France
[4] Kings Coll London, St Thomas Hosp, Dept Biomed Engn, London, England
[5] Univ Oxford, Dept Comp Sci, Oxford OX1 2JD, England
[6] Rochester Inst Technol, Computat Biomed Lab, Rochester, NY 14623 USA
[7] Univ Toronto, Sunnybrook Hlth Sci Ctr, Toronto, ON M5S 1A1, Canada
[8] Zhejiang Univ, State Key Lab Modern Opt Instrumentat, Hangzhou 310003, Zhejiang, Peoples R China
[9] Med Univ Graz, Inst Biophys, Graz, Austria
[10] Univ Valencia, Computat Multiscale Physiol Lab, Valencia, Spain
[11] Chinese Univ Hong Kong, Hong Kong, Hong Kong, Peoples R China
基金
中国国家自然科学基金; 加拿大健康研究院; 英国工程与自然科学研究理事会;
关键词
Heart electrophysiology; Model integration; Optical mapping data; Parameter personalization; Phenomenological models; Fast conduction Purkinje system; Detailed ionic models; Maximum a posteriori estimation; DATA ASSIMILATION; HEART; FRAMEWORK; MRI; CONDUCTIVITY; ACTIVATION;
D O I
10.1016/j.pbiomolbio.2011.07.007
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Computational models of the heart at various scales and levels of complexity have been independently developed, parameterised and validated using a wide range of experimental data for over four decades. However, despite remarkable progress, the lack of coordinated efforts to compare and combine these computational models has limited their impact on the numerous open questions in cardiac physiology. To address this issue, a comprehensive dataset has previously been made available to the community that contains the cardiac anatomy and fibre orientations from magnetic resonance imaging as well as epicardial transmembrane potentials from optical mapping measured on a perfused ex-vivo porcine heart. This data was used to develop and customize four models of cardiac electrophysiology with different level of details, including a personalized fast conduction Purkinje system, a maximum a posteriori estimation of the 3D distribution of transmembrane potential, the personalization of a simplified reaction-diffusion model, and a detailed biophysical model with generic conduction parameters. This study proposes the integration of these four models into a single modelling and simulation pipeline, after analyzing their common features and discrepancies. The proposed integrated pipeline demonstrates an increase prediction power of depolarization isochrones in different pacing conditions. (C) 2011 Elsevier Ltd. All rights reserved.
引用
收藏
页码:122 / 133
页数:12
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