Accuracy of six commercially available systems for identification of members of the family Vibrionaceae

被引:73
作者
O'Hara, CM
Sowers, EG
Bopp, CA
Duda, SB
Strockbine, NA
机构
[1] Ctr Dis Control & Prevent, Atlanta, GA 30333 USA
[2] Epidemiol & Lab Branch, Div Healthcare Qual Promot, Atlanta, GA 30333 USA
[3] Div Bacterial & Mycot Dis, Foodborne & Diarrheal Dis Lab, Atlanta, GA 30333 USA
关键词
D O I
10.1128/JCM.41.12.5654-5659.2003
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Six commercially available bacterial identification products were tested with Vibrio alginolyticus (12 strains), V. cholerae (30 strains), Photobacterium (Vibrio) damselae (10 strains), V. fluvialis (10 strains), V. furnissii (4 strains), V. hollisae (10 strains), V. metschnikovii (9 strains), V. mimicus (10 strains), V parahaemolyticus (30 strains), and V. vulnificus (10 strains) to determine the accuracy of each system for identification. The products included API 20E, Crystal E/NF, MicroScan Neg ID2 and Rapid Neg ID3, and Vitek GNI+ and ID-GNB. Each product was tested only with those species that were listed in its database. Overall, the systems correctly identified 63.9, 80.9, 63.1, 73.6, 73.5, and 77.7% of the isolates to species level, respectively. Error rates ranged from 0.8% for the API 20E to 10.4% for the Rapid Neg ID3. The API 20E gave "no identification" for 13.1% of the isolates, while the Neg ID2, GNI+, ID-GNB, and Crystal were unable to identify 1.8, 2.9, 5.0, and 6.9%, respectively. For V. cholerae, specifically, accuracy ranged from 50.0 to 96.7%, with the API 20E having the worst performance and Crystal having the best. V. fluvialis presented the biggest challenge for the AN 20E and the GNI+, with probabilities averaging 10%, while V. mimicus was a major problem with the Crystal E/NF, which identified none of the strains correctly. With the Neg ID2, correct answers were often obtained only after a modified inoculation of the panel with a bacterial suspension prepared with 0.85% NaCl. Additional tests required for identification often included growth in the absence of NaCl, which is not readily available in most clinical laboratories. The only product to correctly identify at least 90% of V. cholerae strains was the Crystal E/NF, and only three of the six products, the API 20E and both of the Vitek cards, correctly identified more than 90% of the V. parahaemolyticus strains. Thus, extreme care must be taken in the interpretation of answers from these six commercially available systems for the identification of Vibrio species.
引用
收藏
页码:5654 / 5659
页数:6
相关论文
共 31 条
[1]   SEVERE GASTROENTERITIS ASSOCIATED WITH VIBRIO-HOLLISAE INFECTION - REPORT OF 2 CASES AND REVIEW [J].
ABBOTT, SL ;
JANDA, JM .
CLINICAL INFECTIOUS DISEASES, 1994, 18 (03) :310-312
[2]   Misidentification of unusual Aeromonas species as members of the genus Vibrio:: A continuing problem [J].
Abbott, SL ;
Seli, LS ;
Catino, M ;
Hartley, MA ;
Janda, JM .
JOURNAL OF CLINICAL MICROBIOLOGY, 1998, 36 (04) :1103-1104
[3]   Vibrio vulnificus biotype 2, pathogenic for eels, is also an opportunistic pathogen for humans [J].
Amaro, C ;
Biosca, EG .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1996, 62 (04) :1454-1457
[4]   EVALUATION OF THE API 20E SYSTEM FOR IDENTIFICATION AND DISCRIMINATION OF VIBRIO-VULNIFICUS BIOTYPE-1 AND BIOTYPE-2 [J].
BIOSCA, EG ;
ESTEVE, C ;
GARAY, E ;
AMARO, C .
JOURNAL OF FISH DISEASES, 1993, 16 (01) :79-82
[5]   Clinical, epidemiological, and microbiological features of Vibrio vulnificus biogroup 3 causing outbreaks of wound infection and bacteraemia in Israel [J].
Bisharat, N ;
Agmon, V ;
Finkelstein, R ;
Raz, R ;
Ben-Dror, G ;
Lerner, L ;
Soboh, S ;
Colodner, R ;
Cameron, DN ;
Wykstra, DL ;
Swerdlow, DL ;
Farmer, JJ .
LANCET, 1999, 354 (9188) :1421-1424
[6]   Vibrio infection in Israel due to changes in fish marketing [J].
Bisharat, N ;
Raz, R .
LANCET, 1996, 348 (9041) :1585-1586
[7]   VIBRIO-CINCINNATIENSIS SP-NOV, A NEW HUMAN PATHOGEN [J].
BRAYTON, PR ;
BODE, RB ;
COLWELL, RR ;
MACDONELL, MT ;
HALL, HL ;
GRIMES, DJ ;
WEST, PA ;
BRYANT, TN .
JOURNAL OF CLINICAL MICROBIOLOGY, 1986, 23 (01) :104-108
[8]   Clinical manifestations and molecular epidemiology of five cases of diarrhoea in children associated with Vibrio metschnikovii in Arequipa, Peru [J].
Dalsgaard, A ;
Alarcon, A ;
Lanata, CF ;
Jensen, T ;
Hansen, HJ ;
Delgado, F ;
Gil, AI ;
Penny, ME ;
Taylor, D .
JOURNAL OF MEDICAL MICROBIOLOGY, 1996, 45 (06) :494-500
[9]  
EDWARDS P.R., 1972, IDENTIFICATION ENTER
[10]   ENTEROBACTER-SAKAZAKII - A NEW SPECIES OF ENTEROBACTERIACEAE ISOLATED FROM CLINICAL SPECIMENS [J].
FARMER, JJ ;
ASBURY, MA ;
HICKMAN, FW ;
BRENNER, DJ .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1980, 30 (03) :569-584