Draft Genome Sequence of Plant Growth-Promoting Rhizobium Mesorhizobium amorphae, Isolated from Zinc-Lead Mine Tailings

被引:27
作者
Hao, Xiuli [1 ,2 ]
Lin, Yanbing [1 ,2 ]
Johnstone, Laurel [3 ]
Baltrus, David A. [4 ]
Miller, Susan J. [5 ]
Wei, Gehong [1 ]
Rensing, Christopher [2 ]
机构
[1] NW A&F Univ, Coll Life Sci, State Key Lab Crop Stress Biol Arid Areas, Yangling, Shaanxi, Peoples R China
[2] Univ Arizona, Dept Soil Water & Environm Sci, Tucson, AZ USA
[3] Univ Arizona Genet Core, Tucson, AZ USA
[4] Univ Arizona, Dept Plant Sci, Tucson, AZ 85721 USA
[5] Univ Arizona, Arizona Res Labs, Biotechnol Comp Facil, Tucson, AZ USA
基金
美国国家科学基金会; 对外科技合作项目(国际科技项目);
关键词
D O I
10.1128/JB.06475-11
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Here, we describe the draft genome sequence of Mesorhizobium amorphae strain CCNWGS0123, isolated from nodules of Robinia pseudoacacia growing on zinc-lead mine tailings. A large number of metal(loid) resistance genes, as well as genes reported to promote plant growth, were identified, presenting a great future potential for aiding phytoremediation in metal(loid)contaminated soil.
引用
收藏
页码:736 / 737
页数:2
相关论文
共 11 条
[1]   The RAST server: Rapid annotations using subsystems technology [J].
Aziz, Ramy K. ;
Bartels, Daniela ;
Best, Aaron A. ;
DeJongh, Matthew ;
Disz, Terrence ;
Edwards, Robert A. ;
Formsma, Kevin ;
Gerdes, Svetlana ;
Glass, Elizabeth M. ;
Kubal, Michael ;
Meyer, Folker ;
Olsen, Gary J. ;
Olson, Robert ;
Osterman, Andrei L. ;
Overbeek, Ross A. ;
McNeil, Leslie K. ;
Paarmann, Daniel ;
Paczian, Tobias ;
Parrello, Bruce ;
Pusch, Gordon D. ;
Reich, Claudia ;
Stevens, Rick ;
Vassieva, Olga ;
Vonstein, Veronika ;
Wilke, Andreas ;
Zagnitko, Olga .
BMC GENOMICS, 2008, 9 (1)
[2]   Metal biosorption capability of Cupriavidus taiwanensis and its effects on heavy metal removal by nodulated Mimosa pudica [J].
Chen, Wen-Ming ;
Wu, Chih-Hui ;
James, Euan K. ;
Chang, Jo-Shu .
JOURNAL OF HAZARDOUS MATERIALS, 2008, 151 (2-3) :364-371
[3]   Phylogenetic comparison and classification of laccase and related multicopper oxidase protein sequences [J].
Hoegger, PJ ;
Kilaru, S ;
James, TY ;
Thacker, JR ;
Kues, U .
FEBS JOURNAL, 2006, 273 (10) :2308-2326
[4]  
Kaneko T, 2000, DNA RES, V7, P331, DOI 10.1093/dnares/7.6.331
[5]   Plant growth promoting rhizobacteria and endophytes accelerate phytoremediation of metalliferous soils [J].
Ma, Y. ;
Prasad, M. N. V. ;
Rajkumar, M. ;
Freitas, H. .
BIOTECHNOLOGY ADVANCES, 2011, 29 (02) :248-258
[6]   Genome sequencing in microfabricated high-density picolitre reactors [J].
Margulies, M ;
Egholm, M ;
Altman, WE ;
Attiya, S ;
Bader, JS ;
Bemben, LA ;
Berka, J ;
Braverman, MS ;
Chen, YJ ;
Chen, ZT ;
Dewell, SB ;
Du, L ;
Fierro, JM ;
Gomes, XV ;
Godwin, BC ;
He, W ;
Helgesen, S ;
Ho, CH ;
Irzyk, GP ;
Jando, SC ;
Alenquer, MLI ;
Jarvie, TP ;
Jirage, KB ;
Kim, JB ;
Knight, JR ;
Lanza, JR ;
Leamon, JH ;
Lefkowitz, SM ;
Lei, M ;
Li, J ;
Lohman, KL ;
Lu, H ;
Makhijani, VB ;
McDade, KE ;
McKenna, MP ;
Myers, EW ;
Nickerson, E ;
Nobile, JR ;
Plant, R ;
Puc, BP ;
Ronan, MT ;
Roth, GT ;
Sarkis, GJ ;
Simons, JF ;
Simpson, JW ;
Srinivasan, M ;
Tartaro, KR ;
Tomasz, A ;
Vogt, KA ;
Volkmer, GA .
NATURE, 2005, 437 (7057) :376-380
[7]   Characterization of Nops, nodulation outer proteins, secreted via the type III secretion system of NGR234 [J].
Marie, C ;
Deakin, WJ ;
Viprey, V ;
Kopciñska, J ;
Golinowski, W ;
Krishnan, HB ;
Perret, X ;
Broughton, WJ .
MOLECULAR PLANT-MICROBE INTERACTIONS, 2003, 16 (09) :743-751
[8]   Rhizobium type III secretion systems:: legume charmers or alarmers? [J].
Marie, C ;
Broughton, WJ ;
Deakin, WJ .
CURRENT OPINION IN PLANT BIOLOGY, 2001, 4 (04) :336-342
[9]   Crystal structure and electron transfer kinetics of CueO, a multicopper oxidase required for copper homeostasis in Escherichia coli [J].
Roberts, SA ;
Weichsel, A ;
Grass, G ;
Thakali, K ;
Hazzard, JT ;
Tollin, G ;
Rensing, C ;
Montfort, WR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (05) :2766-2771
[10]   Invasive Robinia pseudoacacia in China is nodulated by Mesorhizobium and Sinorhizobium species that share similar nodulation genes with native American symbionts [J].
Wei, Gehong ;
Chen, Weimin ;
Zhu, Wenfei ;
Chen, Chun ;
Young, J. Peter W. ;
Bontemps, Cyril .
FEMS MICROBIOLOGY ECOLOGY, 2009, 68 (03) :320-328