DNA microarrays in the clinic: how soon, how extensively?

被引:5
作者
Jordan, Bertrand R. [1 ]
机构
[1] Marseille Nice Genopole, F-13278 Marseille 9, France
关键词
COMPARATIVE GENOMIC HYBRIDIZATION; GENE-EXPRESSION MEASUREMENTS; PRENATAL-DIAGNOSIS; COPY NUMBER; SIGNATURE; CANCER; ARRAYS; OLIGONUCLEOTIDES;
D O I
10.1002/bies.20598
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Although DNA microarrays are now widely used in research settings, they have been slow to penetrate clinical practice in spite of their apparent advantages. This is due to the very different requirements for a clinical test in contrast to a research tool, and to a strict necessity for demonstrated clinical utility. There is a clear differentiation between two types of DNA array tests: "genomic" diagnostics, developed to ascertain the presence or absence of mutations, deletions or duplications, and for which clinical evidence is already established, and tests using expression profiling for prognosis or predictive purposes, in which case the clinical correlate must be proven. Most array diagnostics currently used belong, understandably, to the "genomic" variety. It is to be expected that future improvements in tailored technology, as well as a logical trend towards measuring an ever-increasing number of parameters, will ensure an important diagnostic role for DNA arrays in the coming decade.
引用
收藏
页码:699 / 705
页数:7
相关论文
共 39 条
[1]   Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling [J].
Alizadeh, AA ;
Eisen, MB ;
Davis, RE ;
Ma, C ;
Lossos, IS ;
Rosenwald, A ;
Boldrick, JG ;
Sabet, H ;
Tran, T ;
Yu, X ;
Powell, JI ;
Yang, LM ;
Marti, GE ;
Moore, T ;
Hudson, J ;
Lu, LS ;
Lewis, DB ;
Tibshirani, R ;
Sherlock, G ;
Chan, WC ;
Greiner, TC ;
Weisenburger, DD ;
Armitage, JO ;
Warnke, R ;
Levy, R ;
Wilson, W ;
Grever, MR ;
Byrd, JC ;
Botstein, D ;
Brown, PO ;
Staudt, LM .
NATURE, 2000, 403 (6769) :503-511
[2]   Molecular genetics of CYP2D6:: Clinical relevance with focus on psychotropic drugs [J].
Bertilsson, L ;
Dahl, ML ;
Dalén, P ;
Al-Shurbaji, A .
BRITISH JOURNAL OF CLINICAL PHARMACOLOGY, 2002, 53 (02) :111-122
[3]   Gene expression profiling of cancer by use of DNA arrays: how far from the clinic? [J].
Bertucci, F ;
Houlgatte, R ;
Nguyen, C ;
Viens, P ;
Jordan, BR ;
Birnbaum, D .
LANCET ONCOLOGY, 2001, 2 (11) :674-682
[4]   Cystic fibrosis: A worldwide analysis of CFTR mutations - Correlation with incidence data and application to screening [J].
Bobadilla, JL ;
Macek, M ;
Fine, JP ;
Farrell, PM .
HUMAN MUTATION, 2002, 19 (06) :575-606
[5]   Gene signature evaluation as a prognostic tool: challenges in the design of the MINDACT trial [J].
Bogaerts, Jan ;
Cardoso, Fatima ;
Buyse, Marc ;
Braga, Sofia ;
Loi, Sherene ;
Harrison, Jillian A. ;
Bines, Jacques ;
Mook, Stella ;
Decker, Nuria ;
Ravdin, Peter ;
Therasse, Patrick ;
Rutgers, Emiel ;
van't Veer, Laura J. ;
Piccart, Martine .
NATURE CLINICAL PRACTICE ONCOLOGY, 2006, 3 (10) :540-551
[6]   The value of microarray techniques for quantitative gene profiling in molecular diagnostics [J].
Bustin, SA ;
Dorudi, S .
TRENDS IN MOLECULAR MEDICINE, 2002, 8 (06) :269-272
[7]   A five-gene signature and clinical outcome in non-small-cell lung cancer [J].
Chen, Hsuan-Yu ;
Yu, Sung-Liang ;
Chen, Chun-Houh ;
Chang, Gee-Chen ;
Chen, Chih-Yi ;
Yuan, Ang ;
Cheng, Chiou-Ling ;
Wang, Chien-Hsun ;
Terng, Harn-Jing ;
Kao, Shu-Fang ;
Chan, Wing-Kai ;
Li, Han-Ni ;
Liu, Chun-Chi ;
Singh, Sher ;
Chen, Wei J. ;
Chen, Jeremy J. W. ;
Yang, Pan-Chyr .
NEW ENGLAND JOURNAL OF MEDICINE, 2007, 356 (01) :11-20
[8]   The AmpliChip™ CYP450 Genotyping Test -: Integrating a new clinical tool [J].
de Leon, Jose ;
Susce, Margaret T. ;
Murray-Carmichael, Elaina .
MOLECULAR DIAGNOSIS & THERAPY, 2006, 10 (03) :135-151
[9]  
ERLANDER M, 2004, J CLIN ONCOLOGY S, V22, P9545
[10]   Converting a breast cancer microarray signature into a high-throughput diagnostic test [J].
Glas, Annuska M. ;
Floore, Arno ;
Delahaye, Leonie J. M. J. ;
Witteveen, Anke T. ;
Pover, Rob C. F. ;
Bakx, Niels ;
Lahti-Domenici, Jaana S. T. ;
Bruinsma, Tako J. ;
Warmoes, Marc O. ;
Bernards, Rene ;
Wessels, Lodewyk F. A. ;
Van 't Veer, Laura J. .
BMC GENOMICS, 2006, 7 (1)