HP-RARE 1.0: a computer program for performing rarefaction on measures of allelic richness

被引:1906
作者
Kalinowski, ST [1 ]
机构
[1] Montana State Univ, Dept Ecol, Bozeman, MT 59717 USA
来源
MOLECULAR ECOLOGY NOTES | 2005年 / 5卷 / 01期
关键词
alleles; allelic richness; estimation; genetic diversity; rarefaction;
D O I
10.1111/j.1471-8286.2004.00845.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
yThe number of alleles in a sample (allelic richness) is a fundamental measure of genetic diversity. However, this diversity measure has been difficult to use because large samples are expected to contain more alleles than small samples. The statistical technique of rarefaction compensates for this sampling disparity. Here I introduce a computer program that performs rarefaction on private alleles and hierarchical sampling designs.
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页码:187 / 189
页数:3
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