Reappraisal of the Relationship between the HIV-1-Protective Single-Nucleotide Polymorphism 35 Kilobases Upstream of the HLA-C Gene and Surface HLA-C Expression

被引:46
作者
Corrah, Tumena W. [1 ]
Goonetilleke, Nilu [1 ]
Kopycinski, Jakub [2 ]
Deeks, Steven G. [3 ]
Cohen, Myron S. [4 ]
Borrow, Persephone [5 ]
McMichael, Andrew [1 ]
Brackenridge, Simon [1 ]
机构
[1] Univ Oxford, Weatherall Inst Mol Med, Oxford OX3 9DS, England
[2] Univ London Imperial Coll Sci Technol & Med, IAVI Human Immunol Lab, London, England
[3] Univ Calif San Francisco, Dept Med, San Francisco, CA USA
[4] Univ N Carolina, Sch Med, Dept Med, Chapel Hill, NC USA
[5] Univ Oxford, Nuffield Dept Clin Med, Oxford OX3 9DS, England
基金
英国惠康基金;
关键词
CLASS-I MOLECULES; SEQUENCE-DERIVED PEPTIDES; NATURAL-KILLER-CELLS; HIV-1; INFECTION; VIRAL LOAD; MONOCLONAL-ANTIBODIES; MAJOR DETERMINANTS; VIRUS-REPLICATION; IMMUNE CONTROL; HOST CONTROL;
D O I
10.1128/JVI.02276-10
中图分类号
Q93 [微生物学];
学科分类号
071005 [微生物学];
摘要
Previous studies have found an association between a single-nucleotide polymorphism 35 kb upstream of the HLA-C locus (-35 SNP), HLA-C expression, and HIV-1 set point viral loads. We show that the difference in HLA-C expression across -35 SNP genotypes can be attributed primarily to the very low expression of a single allelic product, HLA-Cw7, which is a common HLA type. We suggest that association of the -35 SNP and HIV-1 load manifests as a result of linkage disequilibrium of this polymorphism with both favorable and unfavorable HLA-C and -B alleles.
引用
收藏
页码:3367 / 3374
页数:8
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