Cross-correlated relaxation enhanced 1H-13C NMR spectroscopy of methyl groups in very high molecular weight proteins and protein complexes

被引:502
作者
Tugarinov, V
Hwang, PM
Ollerenshaw, JE
Kay, LE
机构
[1] Univ Toronto, Prot Engn Network Ctr Excellence, Toronto, ON M5S 1A8, Canada
[2] Univ Toronto, Dept Med Genet, Toronto, ON M5S 1A8, Canada
[3] Univ Toronto, Dept Biochem & Chem, Toronto, ON M5S 1A8, Canada
关键词
D O I
10.1021/ja030153x
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A comparison of HSQC and HMQC pulse schemes for recording H-1-C-13 correlation maps of protonated methyl groups in highly deuterated proteins is presented. It is shown that HMQC correlation maps can be as much as a factor of 3 more sensitive than their HSQC counterparts and that the sensitivity gains result from a TROSY effect that involves cancellation of intra-methyl dipolar relaxation interactions. H-1-C-13 correlation spectra are recorded on U-[N-15,H-2], lledelta1-[C-13,H-1] samples of (i) malate synthase G, a 723 residue protein, at 37 and 5degreesC, and of (ii) the protease ClpP, comprising 14 identical subunits, each with 193 residues (305kDa), at 5degreesC. The high quality of HMQC spectra obtained in short measuring times strongly suggests that methyl groups will be useful probes of structure and dynamics in supramolecular complexes.
引用
收藏
页码:10420 / 10428
页数:9
相关论文
共 44 条
[1]   CORRELATION OF PROTON AND N-15 CHEMICAL-SHIFTS BY MULTIPLE QUANTUM NMR [J].
BAX, A ;
GRIFFEY, RH ;
HAWKINS, BL .
JOURNAL OF MAGNETIC RESONANCE, 1983, 55 (02) :301-315
[2]   MULTIDIMENSIONAL NUCLEAR-MAGNETIC-RESONANCE METHODS FOR PROTEIN STUDIES [J].
BAX, A .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 1994, 4 (05) :738-744
[3]   COMPARISON OF DIFFERENT MODES OF 2-DIMENSIONAL REVERSE-CORRELATION NMR FOR THE STUDY OF PROTEINS [J].
BAX, A ;
IKURA, M ;
KAY, LE ;
TORCHIA, DA ;
TSCHUDIN, R .
JOURNAL OF MAGNETIC RESONANCE, 1990, 86 (02) :304-318
[4]   NATURAL ABUNDANCE N-15 NMR BY ENHANCED HETERONUCLEAR SPECTROSCOPY [J].
BODENHAUSEN, G ;
RUBEN, DJ .
CHEMICAL PHYSICS LETTERS, 1980, 69 (01) :185-189
[5]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[6]   Thermal offset viscosities of liquid H2O, D2O, and T2O [J].
Cho, CH ;
Urquidi, J ;
Singh, S ;
Robinson, GW .
JOURNAL OF PHYSICAL CHEMISTRY B, 1999, 103 (11) :1991-1994
[7]   Distribution of molecular size within an unfolded state ensemble using small-angle X-ray scattering and pulse field gradient NMR techniques [J].
Choy, WY ;
Mulder, FAA ;
Crowhurst, KA ;
Muhandiram, DR ;
Millett, IS ;
Doniach, S ;
Forman-Kay, JD ;
Kay, LE .
JOURNAL OF MOLECULAR BIOLOGY, 2002, 316 (01) :101-112
[8]  
CLORE GM, 1991, SCIENCE, V252, P1309
[9]   NMRPIPE - A MULTIDIMENSIONAL SPECTRAL PROCESSING SYSTEM BASED ON UNIX PIPES [J].
DELAGLIO, F ;
GRZESIEK, S ;
VUISTER, GW ;
ZHU, G ;
PFEIFER, J ;
BAX, A .
JOURNAL OF BIOMOLECULAR NMR, 1995, 6 (03) :277-293
[10]   ROTATIONAL AND TRANSLATIONAL DIFFUSION OF SHORT RODLIKE MOLECULES IN SOLUTION - OLIGONUCLEOTIDES [J].
EIMER, W ;
PECORA, R .
JOURNAL OF CHEMICAL PHYSICS, 1991, 94 (03) :2324-2329