Mechanosensitive membrane channels in action

被引:90
作者
Yefimov, Serge [1 ]
van der Giessen, Erik [1 ]
Onck, P. R. [1 ]
Marrink, Siewert J. [1 ]
机构
[1] Univ Groningen, Groningen Biomolecular Sci & Biotechnol Inst, Dept Biophys Chem, NL-9700 AB Groningen, Netherlands
关键词
D O I
10.1529/biophysj.107.119966
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
The tension-driven gating process of MscL from Mycobacterium tuberculosis, Tb-MscL, has been addressed at near-atomic detail using coarse-grained molecular dynamics simulations. To perform the simulations, a novel coarse-grained peptide model based on a thermodynamic parameterization of the amino-acid side chains has been applied. Both the wild-type Tb-MscL and its gain-of-function mutant V21 D embedded in a solvated lipid bilayer have been studied. To mimic hypoosmotic shock conditions, simulations were performed at increasing levels of membrane tension approaching the rupture threshold of the lipid bilayer. Both the wild-type and the mutant channel are found to undergo significant conformational changes in accordance with an irislike expansion mechanism, reaching a conducting state on a microsecond timescale. The most pronounced expansion of the pore has been observed for the V21 D mutant, which is consistent with the experimentally shown gain-of-function phenotype of the V21 D mutant.
引用
收藏
页码:2994 / 3002
页数:9
相关论文
共 54 条
[1]   Release of thioredoxin via the mechanosensitive channel MscL during osmotic downshock of Escherichia coli cells [J].
Ajouz, B ;
Berrier, C ;
Garrigues, A ;
Besnard, M ;
Ghazi, E .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (41) :26670-26674
[2]   Channel gate! Tension, leak and disclosure [J].
Batiza, AF ;
Rayment, I ;
Kung, C .
STRUCTURE, 1999, 7 (05) :R99-R103
[3]   MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH [J].
BERENDSEN, HJC ;
POSTMA, JPM ;
VANGUNSTEREN, WF ;
DINOLA, A ;
HAAK, JR .
JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) :3684-3690
[4]   A large iris-like expansion of a mechanosensitive channel protein induced by membrane tension [J].
Betanzos, M ;
Chiang, CS ;
Guy, HR ;
Sukharev, S .
NATURE STRUCTURAL BIOLOGY, 2002, 9 (09) :704-710
[5]   Insertion and assembly of membrane proteins via simulation [J].
Bond, PJ ;
Sansom, MSP .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (08) :2697-2704
[6]   Lipid composition and the lateral pressure profile in bilayers [J].
Cantor, RS .
BIOPHYSICAL JOURNAL, 1999, 76 (05) :2625-2639
[7]   Structure of the MscL homolog from Mycobacterium tuberculosis:: A gated mechanosensitive ion channel [J].
Chang, G ;
Spencer, RH ;
Lee, AT ;
Barclay, MT ;
Rees, DC .
SCIENCE, 1998, 282 (5397) :2220-2226
[8]   Simulation of MscL Gating in a bilayer under stress [J].
Colombo, G ;
Marrink, SJ ;
Mark, AE .
BIOPHYSICAL JOURNAL, 2003, 84 (04) :2331-2337
[9]   Estimation of the pore size of the large-conductance mechanosensitive ion channel of Escherichia coli [J].
Cruickshank, CC ;
Minchin, RF ;
LeDain, AC ;
Martinac, B .
BIOPHYSICAL JOURNAL, 1997, 73 (04) :1925-1931
[10]   Investigating lipid composition effects on the mechanosensitive channel of large conductance (MscL) using molecular dynamics simulations [J].
Elmore, DE ;
Dougherty, DA .
BIOPHYSICAL JOURNAL, 2003, 85 (03) :1512-1524