Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels

被引:294
作者
Bengtsson, M [1 ]
Ståhlberg, A
Rorsman, P
Kubista, M
机构
[1] Lund Univ, Dept Expt Med Sci, S-22184 Lund, Sweden
[2] Chalmers Univ Technol, Dept Chem & Biosci, S-40530 Gothenburg, Sweden
[3] TATAA Bioctr, Lundberg Lab, S-40530 Gothenburg, Sweden
[4] Churchill Hosp, Oxford Ctr Diabet Endocrinol & Metab, Oxford OX3 7LJ, England
关键词
D O I
10.1101/gr.3820805
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The transcriptional machinery in individual cells is controlled by a relatively small [lumber of molecules, Which may result in stochastic behavior in gene activity. Because of technical limitations in current collection and recording methods, most gene expression measurements are carried out on Populations of cells and therefore reflect average mRNA levels. The variability of the transcript levels between different cells remains undefined, although it may have profound effects on cellular activities. Here we have measured gene expression levels of the five genes AA, Ins1, Ins2, Abcc8, and Kcnj11 in individual cells from mouse pancreatic islets. Whereas Ins1 and 1ns2 expression show a strong cell-cell correlation, this is not the case for the other genes. We further found that the transcript levels of the different genes are lognormally distributed. Hence, the geometric mean of expression levels provides a better estimate of gene activity of the typical cell than does the arithmetic mean measured on a cell population.
引用
收藏
页码:1388 / 1392
页数:5
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