Deep Sequencing of Plasma and Proviral HIV-1 to Establish Coreceptor Usage: What Is the Clinical Impact of the Quasispecies Distribution?

被引:5
作者
Abbate, Isabella [1 ]
Rozera, Gabriella [1 ]
Giombini, Emanuela [1 ]
D'Offizi, Gianpiero [1 ]
Nicastri, Emanuele [1 ]
Narciso, Pasquale [1 ]
Ippolito, Giuseppe [1 ]
Capobianchi, Maria R. [1 ]
机构
[1] Natl Inst Infect Dis INMI, Virol Lab, Clin Dept, I-29200149 Rome, Italy
关键词
TROPISM;
D O I
10.1093/infdis/jir427
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
引用
收藏
页码:971 / U164
页数:3
相关论文
共 11 条
[1]   Analysis of co-receptor usage of circulating viral and proviral HIV genome quasispecies by ultra-deep pyrosequencing in patients who are candidates for CCR5 antagonist treatment [J].
Abbate, I. ;
Rozera, G. ;
Tommasi, C. ;
Bruselles, A. ;
Bartolini, B. ;
Chillemi, G. ;
Nicastri, E. ;
Narciso, P. ;
Ippolito, G. ;
Capobianchi, M. R. .
CLINICAL MICROBIOLOGY AND INFECTION, 2011, 17 (05) :725-731
[2]   Genotypic Tests for Determining Coreceptor Usage of HIV-1 [J].
Kuritzkes, Daniel R. .
JOURNAL OF INFECTIOUS DISEASES, 2011, 203 (02) :146-148
[3]   Tropism testing in the clinical management of HIV-1 infection [J].
Lin, Nina H. ;
Kuritzkes, Daniel R. .
CURRENT OPINION IN HIV AND AIDS, 2009, 4 (06) :481-487
[4]   Comparative determination of HIV-1 co-receptor tropism by Enhanced Sensitivity Trofile, gp120 V3-loop RNA and DNA genotyping [J].
Prosperi, Mattia C. F. ;
Bracciale, Laura ;
Fabbiani, Massimiliano ;
Di Giambenedetto, Simona ;
Razzolini, Francesca ;
Meini, Genny ;
Colafigli, Manuela ;
Marzocchetti, Angela ;
Cauda, Roberto ;
Zazzi, Maurizio ;
De Luca, Andrea .
RETROVIROLOGY, 2010, 7
[5]   CXCR4-using viruses in plasma and peripheral blood mononuclear cells during primary HIV-1 infection and impact on disease progression [J].
Raymond, Stephanie ;
Delobel, Pierre ;
Mavigner, Maud ;
Cazabat, Michelle ;
Encinas, Stephanie ;
Souyris, Corinne ;
Bruel, Patrick ;
Sandres-Saune, Karine ;
Marchou, Bruno ;
Massip, Patrice ;
Izopet, Jacques .
AIDS, 2010, 24 (15) :2305-2312
[6]   Massively parallel pyrosequencing highlights minority variants in the HIV-1 env quasispecies deriving from lymphomonocyte sub-populations [J].
Rozera, Gabriella ;
Abbate, Isabella ;
Bruselles, Alessandro ;
Vlassi, Crhysoula ;
D'Offizi, Gianpiero ;
Narciso, Pasquale ;
Chillemi, Giovanni ;
Prosperi, Mattia ;
Ippolito, Giuseppe ;
Capobianchi, Maria R. .
RETROVIROLOGY, 2009, 6
[7]   Performance of Genotypic Algorithms for Predicting HIV-1 Tropism Measured against the Enhanced-Sensitivity Trofile Coreceptor Tropism Assay [J].
Sanchez, Victoria ;
Masia, Mar ;
Robledano, Catalina ;
Padilla, Sergio ;
Manuel Ramos, Jose ;
Gutierrez, Felix .
JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (11) :4135-4139
[8]   Dynamics of HIV tropism under suppressive antiretroviral therapy: implications for tropism testing in subjects with undetectable viraemia [J].
Seclen, Eduardo ;
del Mar Gonzalez, Maria ;
de Mendoza, Carmen ;
Soriano, Vincent ;
Poveda, Eva .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2010, 65 (07) :1493-1496
[9]   Factors associated with proviral DNA HIV-1 tropism in antiretroviral therapy-treated patients with fully suppressed plasma HIV viral load: implications for the clinical use of CCR5 antagonists [J].
Soulie, Cathia ;
Fourati, Slim ;
Lambert-Niclot, Sidonie ;
Malet, Isabelle ;
Wirden, Marc ;
Tubiana, Roland ;
Valantin, Marc-Antoine ;
Katlama, Christine ;
Calvez, Vincent ;
Marcelin, Anne-Genevieve .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2010, 65 (04) :749-751
[10]  
Svicher V, 2010, NEW MICROBIOL, V33, P195