Stability of peptide-HLA-I complexes and tapasin folding facilitation - tools to define immunogenic peptides

被引:6
作者
Geironson, Linda [1 ]
Roder, Gustav [2 ]
Paulsson, Kajsa [1 ,2 ]
机构
[1] Lund Univ, Immunol Sect, SE-22184 Lund, Sweden
[2] Univ Copenhagen, Panum Inst 18 3, Dept Expt Immunol, Inst Int Hlth Immunol & Microbiol, DK-2200 Copenhagen, Denmark
基金
英国医学研究理事会;
关键词
Tapasin; MHC-I; Peptide; Stability; Vaccine; ANTIGEN PRESENTATION; MOLECULES; BINDING; TAP; DISSOCIATION; MECHANISM; PREDICTIONS; REPERTOIRE; DEPENDENCE; RETENTION;
D O I
10.1016/j.febslet.2012.03.045
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Only a small fraction of the peptides generated inside the cell end up being presented by HLA-I on the cell surface. High stability of peptide-HLA-I complexes and a low HLA-I tapasin-facilitation have been proposed to predict immunogenicity. We here set out to investigate if these parameters correlated and defined immunogenic peptides. Both peptide-HLA-B*08:01 and peptide-HLA-A*02:01 complexes showed small differences in tapasin-facilitation and larger differences in stability. This suggests that the stability of immunogenic peptide-HLA-I complexes vary above an HLA-I allomorph dependent lower limit (e. g. > 2 h for HLA-A*02:01), immunogenicity predicted by tapasin-facilitation may be defined by an equally allomorph unique upper value (e. g. tapasin-facilitation <1.5 for HLA-A*02:01), and variation above the stability-threshold does not directly reflect a variation in tapasin-facilitation. (C) 2012 Federation of European Biochemical Societies. Published by Elsevier B. V. All rights reserved.
引用
收藏
页码:1336 / 1343
页数:8
相关论文
共 36 条
[1]   A quantitative analysis of the variables affecting the repertoire of T cell specificities recognized after vaccinia virus infection [J].
Assarsson, Erika ;
Sidney, John ;
Oseroff, Carla ;
Pasquetto, Valerie ;
Bui, Huynh-Hoa ;
Frahm, Nicole ;
Brander, Christian ;
Peters, Bjoern ;
Grey, Howard ;
Sette, Alessandro .
JOURNAL OF IMMUNOLOGY, 2007, 178 (12) :7890-7901
[2]   Tapasin-mediated retention and optimization of peptide ligands during the assembly of class I molecules [J].
Barnden, MJ ;
Purcell, AW ;
Gorman, JJ ;
McCluskey, J .
JOURNAL OF IMMUNOLOGY, 2000, 165 (01) :322-330
[3]  
Busch DH, 1998, J IMMUNOL, V160, P4441
[4]   Sensitive quantitative predictions of peptide-MHC binding by a 'Query by Committee' artificial neural network approach [J].
Buus, S ;
Lauemoller, SL ;
Worning, P ;
Kesmir, C ;
Frimurer, T ;
Corbet, S ;
Fomsgaard, A ;
Hilden, J ;
Holm, A ;
Brunak, S .
TISSUE ANTIGENS, 2003, 62 (05) :378-384
[5]   Analysis of interactions in a tapasin/class I complex provides a mechanism for peptide selection [J].
Chen, Mingnan ;
Bouvier, Marlene .
EMBO JOURNAL, 2007, 26 (06) :1681-1690
[6]   Assembly and dissociation of human leukocyte antigen (HLA)-A2 studied by real-time fluorescence resonance energy transfer [J].
Gakamsky, DM ;
Davis, DM ;
Strominger, JL ;
Pecht, I .
BIOCHEMISTRY, 2000, 39 (36) :11163-11169
[7]   Impaired immune responses and altered peptide repertoire in tapasin-deficient mice [J].
Garbi, N ;
Tan, P ;
Diehl, AD ;
Chambers, BJ ;
Ljunggren, HG ;
Momburg, F ;
Hämmerling, GJ .
NATURE IMMUNOLOGY, 2000, 1 (03) :234-238
[8]   Tapasin dependence of major histocompatibility complex class I molecules correlates with their conformational flexibility [J].
Garstka, Malgorzata Anna ;
Fritzsche, Susanne ;
Lenart, Izabela ;
Hein, Zeynep ;
Jankevicius, Gytis ;
Boyle, Louise H. ;
Elliott, Tim ;
Trowsdale, John ;
Antoniou, Antony N. ;
Zacharias, Martin ;
Springer, Sebastian .
FASEB JOURNAL, 2011, 25 (11) :3989-3998
[9]   Regulation of MHC class I heterodimer stability and interaction with TAP by tapasin [J].
Grandea, AG ;
Lehner, PJ ;
Cresswell, P ;
Spies, T .
IMMUNOGENETICS, 1997, 46 (06) :477-483
[10]   DEPENDENCE OF PEPTIDE BINDING BY MHC CLASS-I MOLECULES ON THEIR INTERACTION WITH TAP [J].
GRANDEA, AG ;
ANDROLEWICZ, MJ ;
ATHWAL, RS ;
GERAGHTY, DE ;
SPIES, T .
SCIENCE, 1995, 270 (5233) :105-108