Genome Sequences for Five Strains of the Emerging Pathogen Haemophilus haemolyticus

被引：17

作者：

Jordan, I. King ^{[2
,3
,4
]}

Conley, Andrew B. ^{[3
]}

Antonov, Ivan V. ^{[3
]}

Arthur, Robert A. ^{[3
]}

Cook, Erin D. ^{[3
]}

Cooper, Guy P. ^{[3
]}

Jones, Bernard L. ^{[3
]}

Knipe, Kristen M. ^{[3
]}

Lee, Kevin J. ^{[3
]}

Liu, Xing ^{[3
]}

Mitchell, Gabriel J. ^{[3
]}

Pande, Pushkar R. ^{[3
]}

Petit, Robert A. ^{[3
]}

Qin, Shaopu ^{[3
]}

Rajan, Vani N. ^{[3
]}

Sarda, Shruti ^{[3
]}

Sebastian, Aswathy ^{[3
]}

Tang, Shiyuyun ^{[3
]}

Thapliyal, Racchit ^{[3
]}

Varghese, Neha J. ^{[3
]}

Ye, Tianjun ^{[3
]}

Katz, Lee S. ^{[1
]}

Wang, Xin ^{[1
]}

Rowe, Lori ^{[5
]}

Frace, Michael ^{[5
]}

Mayer, Leonard W. ^{[1
]}

机构：

[1] Ctr Dis Control & Prevent, Meningitis & Vaccine Preventable Dis Branch, Atlanta, GA 30333 USA

[2] Georgia Inst Technol, Sch Biol, Atlanta, GA 30332 USA

[3] Georgia Inst Technol, Computat Genom Grp, Atlanta, GA 30332 USA

[4] PanAmer Bioinformat Inst, Santa Marta, Magdalena, Colombia

[5] CDC, Biotechnol Core Facil Branch, Div Sci Resources, NCPDCID, Atlanta, GA 30333 USA

来源：

JOURNAL OF BACTERIOLOGY | 2011年 / 193卷 / 20期

关键词：

INFLUENZAE; ENDOCARDITIS;

D O I：

10.1128/JB.05863-11

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

We report the first whole-genome sequences for five strains, two carried and three pathogenic, of the emerging pathogen Haemophilus haemolyticus. Preliminary analyses indicate that these genome sequences encode markers that distinguish H. haemolyticus from its closest Haemophilus relatives and provide clues to the identity of its virulence factors.

引用

页码：5879 / 5880

页数：2

共 12 条

[1] INFECTIONS DUE TO HEMOPHILUS SPECIES OTHER THAN H-INFLUENZAE [J].

ALBRITTON, WL .

ANNUAL REVIEW OF MICROBIOLOGY, 1982, 36 :199-216

[2] GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions [J].

Besemer, J ;

Lomsadze, A ;

Borodovsky, M .

NUCLEIC ACIDS RESEARCH, 2001, 29 (12) :2607-2618

[3] Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs [J].

Chevreux, B ;

Pfisterer, T ;

Drescher, B ;

Driesel, AJ ;

Müller, WEG ;

Wetter, T ;

Suhai, S .

GENOME RESEARCH, 2004, 14 (06) :1147-1159

[4]

de Santo DA, 1933, AM J PATHOL, V9, P381

[5] A computational genomics pipeline for prokaryotic sequencing projects [J].

Kislyuk, Andrey O. ;

Katz, Lee S. ;

Agrawal, Sonia ;

Hagen, Matthew S. ;

Conley, Andrew B. ;

Jayaraman, Pushkala ;

Nelakuditi, Viswateja ;

Humphrey, Jay C. ;

Sammons, Scott A. ;

Govil, Dhwani ;

Mair, Raydel D. ;

Tatti, Kathleen M. ;

Tondella, Maria L. ;

Harcourt, Brian H. ;

Mayer, Leonard W. ;

Jordan, I. King .

BIOINFORMATICS, 2010, 26 (15) :1819-1826

[6] Haemophilus influenzae type b infection, vaccination, and H. influenzae carriage in children in Minnesota, 2008-2009 [J].

Lowther, S. A. ;

Shinoda, N. ;

Juni, B. A. ;

Theodore, M. J. ;

Wang, X. ;

Jawahir, S. L. ;

Jackson, M. L. ;

Cohn, A. ;

Danila, R. ;

Lynfield, R. .

EPIDEMIOLOGY AND INFECTION, 2012, 140 (03) :566-574

[7] Genome sequencing in microfabricated high-density picolitre reactors [J].

Margulies, M ;

Egholm, M ;

Altman, WE ;

Attiya, S ;

Bader, JS ;

Bemben, LA ;

Berka, J ;

Braverman, MS ;

Chen, YJ ;

Chen, ZT ;

Dewell, SB ;

Du, L ;

Fierro, JM ;

Gomes, XV ;

Godwin, BC ;

He, W ;

Helgesen, S ;

Ho, CH ;

Irzyk, GP ;

Jando, SC ;

Alenquer, MLI ;

Jarvie, TP ;

Jirage, KB ;

Kim, JB ;

Knight, JR ;

Lanza, JR ;

Leamon, JH ;

Lefkowitz, SM ;

Lei, M ;

Li, J ;

Lohman, KL ;

Lu, H ;

Makhijani, VB ;

McDade, KE ;

McKenna, MP ;

Myers, EW ;

Nickerson, E ;

Nobile, JR ;

Plant, R ;

Puc, BP ;

Ronan, MT ;

Roth, GT ;

Sarkis, GJ ;

Simons, JF ;

Simpson, JW ;

Srinivasan, M ;

Tartaro, KR ;

Tomasz, A ;

Vogt, KA ;

Volkmer, GA .

NATURE, 2005, 437 (7057) :376-380

[8] Relationships of nontypeable Haemophilus influenzae strains to hemolytic and nonhemolytic Haemophilus haemolyticus strains [J].

McCrea, Kirk W. ;

Xie, Jingping ;

LaCross, Nathan ;

Patel, Mayurika ;

Mukundan, Deepa ;

Murphy, Timothy F. ;

Marrs, Carl F. ;

Gilsdorf, Janet R. .

JOURNAL OF CLINICAL MICROBIOLOGY, 2008, 46 (02) :406-416

[9] Subacute bacterial endocarditis due to a hemolytic hemophilic bacillus - Report of a case [J].

Miller, CP ;

Branch, A .

ARCHIVES OF INTERNAL MEDICINE, 1923, 32 (06) :911-926

[10] Pharyngeal colonization dynamics of Haemophilus influenzae and Haemophilus haemolyticus in healthy adult carriers [J].

Mukundan, Deepa ;

Ecevit, Zafer ;

Patel, Mayuri ;

Marrs, Carl F. ;

Gilsdorf, Janet R. .

JOURNAL OF CLINICAL MICROBIOLOGY, 2007, 45 (10) :3207-3217

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