The Sequence Ontology: a tool for the unification of genome annotations

被引：523

作者：

Eilbeck, K

Lewis, SE

Mungall, CJ

Yandell, M

Stein, L

Durbin, R

Ashburner, M

机构：

[1] Univ Cambridge, Dept Genet, Cambridge CB2 3EH, England

[2] Univ Calif Berkeley, Dept Mol & Cellular Biol, Howard Hughes Mem Inst, Berkeley, CA 94729 USA

[3] Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA

[4] Sanger Inst, Hinxton CB10 1SA, Cambs, England

[5] Univ Cambridge, Dept Genet, Cambridge CB2 3EH, England

来源：

GENOME BIOLOGY | 2005年 / 6卷 / 05期

关键词：

D O I：

10.1186/gb-2005-6-5-r44

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 [微生物学]; 0836 [生物工程]; 090102 [作物遗传育种]; 100705 [微生物与生化药学];

摘要：

The Sequence Ontology ( SO) is a structured controlled vocabulary for the parts of a genomic annotation. SO provides a common set of terms and definitions that will facilitate the exchange, analysis and management of genomic data. Because SO treats part-whole relationships rigorously, data described with it can become substrates for automated reasoning, and instances of sequence features described by the SO can be subjected to a group of logical operations termed extensional mereology operators.

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