Blue Moon sampling;
constrained stochastics dynamics;
free energy;
mean force;
reaction coordinates;
D O I:
10.1002/cphc.200400669
中图分类号:
O64 [物理化学(理论化学)、化学物理学];
学科分类号:
070304 ;
081704 ;
摘要:
We give a new formula expressing the components of the mean force in terms of a conditional expectation which can be computed by Blue Moon sampling. This generalizes to the vectorial case a formula first derived by Ruiz-Montero et al. [Mol. Phys. 1997, 90, 925] for a scalar reaction coordinate. We also discuss how to compute this conditional average by means of constrained stochastic dynamics which, unlike the usual constrained molecular dynamics, introduces no bias. Finally, we give a new perspective on bias removal by using constrained molecular dynamics.
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页码:1809 / 1814
页数:6
相关论文
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[1]
Bennett C. H., 1977, ACS Symp. Ser, P63, DOI DOI 10.1021/BK-1977-0046.CH004