Multiple weak hits confuse complex systems: A transcriptional regulatory network as an example

被引:80
作者
Agoston, V
Csermely, P
Pongor, S
机构
[1] Szeged Biol Res Ctr, H-6701 Szeged, Hungary
[2] Semmelweis Univ, Dept Med Chem, H-1444 Budapest, Hungary
[3] Int Ctr Genet Engn & Biotechnol, I-34012 Trieste, Italy
关键词
D O I
10.1103/PhysRevE.71.051909
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 [等离子体物理]; 080103 [流体力学]; 080704 [流体机械及工程];
摘要
Robust systems, like the molecular networks of living cells, are often resistant to single hits such as those caused by high-specificity drugs. Here we show that partial weakening of the Escherichia coli and Saccharomyces cerevisiae transcriptional regulatory networks at a small number (3-5) of selected nodes can have a greater impact than the complete elimination of a single selected node. In both cases, the targeted nodes have the greatest possible impact; still, the results suggest that in some cases broader specificity compounds or multitarget drug therapies may be more effective than individual high-affinity, high-specificity ones. Multiple but partial attacks mimic well a number of in vivo scenarios and may be useful in the efficient modification of other complex systems.
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页数:7
相关论文
共 35 条
[1]
Error and attack tolerance of complex networks [J].
Albert, R ;
Jeong, H ;
Barabási, AL .
NATURE, 2000, 406 (6794) :378-382
[2]
SELF-ORGANIZED CRITICALITY - AN EXPLANATION OF 1/F NOISE [J].
BAK, P ;
TANG, C ;
WIESENFELD, K .
PHYSICAL REVIEW LETTERS, 1987, 59 (04) :381-384
[3]
Emergence of scaling in random networks [J].
Barabási, AL ;
Albert, R .
SCIENCE, 1999, 286 (5439) :509-512
[4]
Systematic discovery of multicomponent therapeutics [J].
Borisy, AA ;
Elliott, PJ ;
Hurst, NW ;
Lee, MS ;
Lehár, J ;
Price, ER ;
Serbedzija, G ;
Zimmermann, GR ;
Foley, MA ;
Stockwell, BR ;
Keith, CT .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (13) :7977-7982
[5]
Strong links are important, but weak links stabilize them [J].
Csermely, P .
TRENDS IN BIOCHEMICAL SCIENCES, 2004, 29 (07) :331-334
[6]
The efficiency of multi-target drugs: the network approach might help drug design [J].
Csermely, P ;
Agoston, V ;
Pongor, S .
TRENDS IN PHARMACOLOGICAL SCIENCES, 2005, 26 (04) :178-182
[7]
Rosiglitazone plus metformin: combination therapy for type 2 diabetes [J].
Del Prato, S ;
Volpe, L .
EXPERT OPINION ON PHARMACOTHERAPY, 2004, 5 (06) :1411-1422
[8]
Size-dependent degree distribution of a scale-free growing network [J].
Dorogovtsev, S.N. ;
Mendes, J.F.F. ;
Samukhin, A.N. .
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2001, 63 (6 I) :1-062101
[9]
ERDOS P, 1960, B INT STATIST INST, V38, P343
[10]
Erdos P., 1959, PUBL MATH-DEBRECEN, V6, P290, DOI [10.5486/PMD.1959.6.3-4.12, DOI 10.5486/PMD.1959.6.3-4.12]