Standardization initiatives in the (eco)toxicogenomics domain: a review

被引:10
作者
Sansone, SA
Morrison, N
Rocca-Serra, P
Fostel, J
机构
[1] EBI, EMBL, Cambridge GB10 1SD, England
[2] Univ Manchester, Sch Comp Sci, Manchester M13 9PL, Lancs, England
[3] Natl Inst Environm Hlth Sci, Natl Ctr Toxicogenom, Res Triangle Pk, NC 27709 USA
来源
COMPARATIVE AND FUNCTIONAL GENOMICS | 2004年 / 5卷 / 08期
关键词
toxicogenomics; ecotoxicogenomics; toxicology; environment; functional genomics; standards; database;
D O I
10.1002/cfg.447
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The purpose of this document is to provide readers with a resource of different ongoing standardization efforts within the 'omics' (genomic, proteomics, metabolomics) and related communities, with particular focus on toxicological and environmental applications. The review includes initiatives within the research community as well as in the regulatory arena. It addresses data management issues (format and reporting structures for the exchange of information) and database interoperability, highlighting key objectives, target audience and participants. A considerable amount of work still needs to be done and, ideally, collaboration should be optimized and duplication and incompatibility should be avoided where possible. The consequence of failing to deliver data standards is an escalation in the burden and cost of data management tasks. Copyright (c) 2005 John Wiley & Sons, Ltd.
引用
收藏
页码:633 / 641
页数:9
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