Integrative analysis for finding genes and networks involved in diabetes and other complex diseases

被引:38
作者
Bergholdt, Regine [1 ]
Storling, Zenia M. [2 ]
Lage, Kasper [2 ]
Karlberg, E. Olof [2 ]
Olason, Pall I. [2 ]
Aalund, Mogens [3 ]
Nerup, Jorn [1 ,4 ]
Brunak, Soren [2 ]
Workman, Christopher T. [2 ]
Pociot, Flemming [1 ,4 ]
机构
[1] Steno Diabet Ctr, DK-2820 Gentofte, Denmark
[2] Tech Univ Denmark, Ctr Biol Sequence Anal, DK-2800 Lyngby, Denmark
[3] Neurotech AS, DK-2100 Copenhagen, Denmark
[4] Lund Univ, Inst Clin Sci, SE-22100 Lund, Sweden
关键词
D O I
10.1186/gb-2007-8-11-r253
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
We have developed an integrative analysis method combining genetic interactions, identified using type l diabetes genome scan data, and a high-confidence human protein interaction network. Resulting networks were ranked by the significance of the enrichment of proteins from interacting regions. We identified a number of new protein network modules and novel candidate genes/ proteins for type 1 diabetes. We propose this type of integrative analysis as a general method for the elucidation of genes and networks involved in diabetes and other complex diseases.
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页数:12
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