Osmolyte trimethylamine-N-oxide does not affect the strength of hydrophobic interactions:: Origin of osmolyte compatibility

被引:141
作者
Athawale, MV
Dordick, JS
Garde, S [1 ]
机构
[1] Rensselaer Polytech Inst, Howard P Isermann Dept Chem & Biol Engn, Troy, NY 12180 USA
[2] Rensselaer Polytech Inst, Ctr Biotechnol & Interdisciplinary Studies, Troy, NY 12180 USA
关键词
D O I
10.1529/biophysj.104.056671
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Osmolytes are small organic solutes accumulated at high concentrations by cells/tissues in response to osmotic stress. Osmolytes increase thermodynamic stability of folded proteins and provide protection against denaturing stresses. The mechanism of osmolyte compatibility and osmolyte-induced stability has, therefore, attracted considerable attention in recent years. However, to our knowledge, no quantitative study of osmolyte effects on the strength of hydrophobic interactions has been reported. Here, we present a detailed molecular dynamics simulation study of the effect of the osmolyte trimethylamine-N- oxide ( TMAO) on hydrophobic phenomena at molecular and nanoscopic length scales. Specifically, we investigate the effects of TMAO on the thermodynamics of hydrophobic hydration and interactions of small solutes as well as on the folding-unfolding conformational equilibrium of a hydrophobic polymer in water. The major conclusion of our study is that TMAO has almost no effect either on the thermodynamics of hydration of small nonpolar solutes or on the hydrophobic interactions at the pair and many-body level. We propose that this neutrality of TMAO toward hydrophobic interactions - one of the primary driving forces in protein folding - is at least partially responsible for making TMAO a "compatible'' osmolyte. That is, TMAO can be tolerated at high concentrations in organisms without affecting nonspecific hydrophobic effects. Our study implies that protein stabilization by TMAO occurs through other mechanisms, such as unfavorable water-mediated interaction of TMAO with the protein backbone, as suggested by recent experimental studies. We complement the above calculations with analysis of TMAO hydration and changes in water structure in the presence of TMAO molecules. TMAO is an amphiphilic molecule containing both hydrophobic and hydrophilic parts. The precise balance of the effects of hydrophobic and hydrophilic segments of the molecule appears to explain the virtual noneffect of TMAO on the strength of hydrophobic interactions.
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页码:858 / 866
页数:9
相关论文
共 61 条
[1]  
Allen M. P., 2009, Computer Simulation of Liquids
[2]   STABILIZATION OF PROTEIN-STRUCTURE BY SUGARS [J].
ARAKAWA, T ;
TIMASHEFF, SN .
BIOCHEMISTRY, 1982, 21 (25) :6536-6544
[3]   THE STABILIZATION OF PROTEINS BY OSMOLYTES [J].
ARAKAWA, T ;
TIMASHEFF, SN .
BIOPHYSICAL JOURNAL, 1985, 47 (03) :411-414
[4]   MECHANISM OF PROTEIN SALTING IN AND SALTING OUT BY DIVALENT-CATION SALTS - BALANCE BETWEEN HYDRATION AND SALT BINDING [J].
ARAKAWA, T ;
TIMASHEFF, SN .
BIOCHEMISTRY, 1984, 23 (25) :5912-5923
[5]   Hydration of krypton and consideration of clathrate models of hydrophobic effects from the perspective of quasi-chemical theory [J].
Ashbaugh, HS ;
Asthagiri, D ;
Pratt, LR ;
Rempe, SB .
BIOPHYSICAL CHEMISTRY, 2003, 105 (2-3) :323-338
[6]   Forcing thermodynamically unfolded proteins to fold [J].
Baskakov, I ;
Bolen, DW .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (09) :4831-4834
[7]   Proteins in mixed solvents: A molecular-level perspective [J].
Baynes, BM ;
Trout, BL .
JOURNAL OF PHYSICAL CHEMISTRY B, 2003, 107 (50) :14058-14067
[8]   Preventing misfolding of the prion protein by trimethylamine N-oxide [J].
Bennion, BJ ;
DeMarco, ML ;
Daggett, V .
BIOCHEMISTRY, 2004, 43 (41) :12955-12963
[9]   Counteraction of urea-induced protein denaturation by trimethylamine N-oxide:: A chemical chaperone at atomic resolution [J].
Bennion, BJ ;
Daggett, V .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (17) :6433-6438
[10]   GROMACS - A MESSAGE-PASSING PARALLEL MOLECULAR-DYNAMICS IMPLEMENTATION [J].
BERENDSEN, HJC ;
VANDERSPOEL, D ;
VANDRUNEN, R .
COMPUTER PHYSICS COMMUNICATIONS, 1995, 91 (1-3) :43-56