Closing in on the resting state of the shaker K+ channel

被引:238
作者
Pathak, Medha M.
Yarov-Yarovoy, Vladimir
Agarwal, Gautam
Roux, Benoit
Barth, Patrick
Kohout, Susy
Tombola, Francesco
Isacoff, Ehud Y. [1 ]
机构
[1] Univ Calif Berkeley, Biophys Grad Program, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Grad Program Neurosci, Berkeley, CA 94720 USA
[3] Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA
[4] Univ Washington, Dept Pharmacol, Seattle, WA 98195 USA
[5] Univ Washington, Dept Biochem, Seattle, WA 98195 USA
[6] Univ Chicago, Inst Mol Pediat Sci, Chicago, IL 60637 USA
[7] Univ Chicago, Dept Biochem & Mol Biol, Chicago, IL 60637 USA
[8] Univ Calif Berkeley, Lawrence Berkeley Lab, Phys Biosci Div, Berkeley, CA 94720 USA
[9] Univ Calif Berkeley, Lawrence Berkeley Lab, Div Sci Mat, Berkeley, CA 94720 USA
关键词
D O I
10.1016/j.neuron.2007.09.023
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Membrane depolarization causes voltage-gated ion channels to transition from a resting/ closed conformation to an activated/open conformation. We used voltage-clamp fluorometry to measure protein motion at specific regions of the Shaker Kv channel. This enabled us to construct new structural models of the resting/ closed and activated/open states based on the Kv1.2 crystal structure using the Rosetta-Membrane method and molecular dynamics simulations. Our models account for the measured gating charge displacement and suggest a molecular mechanism of activation in which the primary voltage sensors, S4s, rotate by similar to 1800 degrees as they move "outward" by 6-8 angstrom. A subsequent tilting motion of the S4s and the pore domain helices, S5s, of all four subunits induces a concerted movement of the channel's S4-S5 linkers and S6 helices, allowing ion conduction. Our models are compatible with a wide body of data and resolve apparent contradictions that previously led to several distinct models of voltage sensing.
引用
收藏
页码:124 / 140
页数:17
相关论文
共 65 条
[1]   Contribution of the S4 segment to gating charge in the Shaker K+ channel [J].
Aggarwal, SK ;
MacKinnon, R .
NEURON, 1996, 16 (06) :1169-1177
[2]   Focused electric field across the voltage sensor of potassium channels [J].
Ahern, CA ;
Horn, R .
NEURON, 2005, 48 (01) :25-29
[3]   Three transmembrane conformations and sequence-dependent displacement of the S4 domain in shaker K+ channel gating [J].
Baker, OS ;
Larsson, HP ;
Mannuzzu, LM ;
Isacoff, EY .
NEURON, 1998, 20 (06) :1283-1294
[4]  
BARTH P, 2007, IN PRESS P NATL ACAD
[5]   GATING OF SHAKER K+ CHANNELS .2. THE COMPONENTS OF GATING CURRENTS AND A MODEL OF CHANNEL ACTIVATION [J].
BEZANILLA, F ;
PEROZO, E ;
STEFANI, E .
BIOPHYSICAL JOURNAL, 1994, 66 (04) :1011-1021
[6]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[7]   Two atomic constraints unambiguously position the S4 segment relative to S1 and S2 segments in the closed state of Shaker K channel [J].
Campos, Fabiana V. ;
Chanda, Baron ;
Roux, Benoit ;
Bezanilla, Francisco .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (19) :7904-7909
[8]   THERMAL MOTIONS OF SURFACE ALPHA-HELICES IN THE D-GALACTOSE CHEMOSENSORY RECEPTOR - DETECTION BY DISULFIDE TRAPPING [J].
CAREAGA, CL ;
FALKE, JJ .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 226 (04) :1219-1235
[9]   VOLTAGE-DEPENDENT GATING OF SODIUM-CHANNELS - CORRELATING STRUCTURE AND FUNCTION [J].
CATTERALL, WA .
TRENDS IN NEUROSCIENCES, 1986, 9 (01) :7-10
[10]   Atomic scale movement of the voltage-sensing region in a potassium channel measured via spectroscopy [J].
Cha, A ;
Snyder, GE ;
Selvin, PR ;
Bezanilla, F .
NATURE, 1999, 402 (6763) :809-813