Simple sequence repeats (microsatellites): mutational mechanisms and contributions to bacterial pathogenesis. A meeting review

被引:28
作者
Bayliss, CD [1 ]
Dixon, KM [1 ]
Moxon, ER [1 ]
机构
[1] John Radcliffe Hosp, Weatherall Inst Molec Med, Molec Infect Dis Grp, Headington, Oxford OX3 9DU, England
来源
FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY | 2004年 / 40卷 / 01期
关键词
microsatellites; simple sequence repeat; contingency genes; phase variation; bacterial pathogenesis; mutation rates;
D O I
10.1016/S0928-8244(03)00325-0
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
This review summarises the presentations and discussions that took place during a European Science Foundation-funded workshop whose purpose was to gain current perspectives on the mutational mechanisms of simple sequence repeats and the contribution of localised hypermutation in such repeats to bacterial pathogenesis. In vitro biophysical and biochemical assays of mutational mechanisms were covered as well as genetic studies in various eukaryotic and prokaryotic organisms. Presentations on bacterial pathogenesis elaborated investigations of the use of repeats for typing of strains, epidemiological investigations of mutation rates and functions of loci whose expression is controlled by simple sequence repeats. This review tabulates current perspectives on the cis- and trans-acting factors for mutation of simple sequence repeats and the orientations of mononucleotide repeats in some bacterial species that utilise repeats for adaptation. (C)Federation of European Microbiological Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:11 / 19
页数:9
相关论文
共 47 条
[1]   Human and bacterial oxidative demethylases repair alkylation damage in both RNA and DNA [J].
Aas, PA ;
Otterlei, M ;
Falnes, PO ;
Vågbo, CB ;
Skorpen, F ;
Akbari, M ;
Sundheim, O ;
Bjorås, M ;
Slupphaug, G ;
Seeberg, E ;
Krokan, HE .
NATURE, 2003, 421 (6925) :859-863
[2]   Cutting edge: Carbohydrate profiling identifies new pathogens that interact with dendritic cell-specific ICAM-3-grabbing nonintegrin on dendritic cells [J].
Appelmelk, BJ ;
van Die, I ;
van Vliet, SJ ;
Vandenbroucke-Grauls, CMJE ;
Geijtenbeek, TBH ;
van Kooyk, Y .
JOURNAL OF IMMUNOLOGY, 2003, 170 (04) :1635-1639
[3]   Phase variation in Helicobacter pylori lipopolysaccharide due to changes in the lengths of poly(C) tracts in α3-fucosyltransferase genes [J].
Appelmelk, BJ ;
Martin, SL ;
Monteiro, MA ;
Clayton, CA ;
McColm, AA ;
Zheng, PY ;
Verboom, T ;
Maaskant, JJ ;
Van den Eijnden, DH ;
Hokke, CH ;
Perry, MB ;
Vandenbroucke-Grauls, CMJE ;
Kusters, JG .
INFECTION AND IMMUNITY, 1999, 67 (10) :5361-5366
[4]   Mutations in poll but not mutSLH destabilize Haemophilus influenzae tetranucleotide repeats [J].
Bayliss, CD ;
van de Ven, T ;
Moxon, ER .
EMBO JOURNAL, 2002, 21 (06) :1465-1476
[5]   The simple sequence contingency loci of Haemophilus influenzae and Neisseria meningitidis [J].
Bayliss, CD ;
Field, D ;
Moxon, ER .
JOURNAL OF CLINICAL INVESTIGATION, 2001, 107 (06) :657-662
[6]   Pivotal role of the β-clamp in translesion DNA synthesis and mutagenesis in E-coli cells [J].
Becherel, OJ ;
Fuchs, RPP ;
Wagner, J .
DNA REPAIR, 2002, 1 (09) :703-708
[7]  
Bennett P, 2000, J CLIN PATHOL-MOL PA, V53, P177
[8]   Host-derived sialic acid is incorporated into Haemophilus influenzae lipopolysaccharide and is a major virulence factor in experimental otitis media [J].
Bouchet, V ;
Hood, DW ;
Li, JJ ;
Brisson, JR ;
Randle, GA ;
Martin, A ;
Li, Z ;
Goldstein, R ;
Schweda, EKH ;
Pelton, SI ;
Richards, JC ;
Moxon, ER .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (15) :8898-8903
[9]   Cis-acting modifiers of expanded CAG CTG triplet repeat expandability:: associations with flanking GC content and proximity to CpG islands [J].
Brock, GJR ;
Anderson, NH ;
Monckton, DG .
HUMAN MOLECULAR GENETICS, 1999, 8 (06) :1061-1067
[10]  
Craven RJ, 2002, GENETICS, V161, P493