Protein folding from a combinatorial perspective

被引:30
作者
Sauer, RT
机构
[1] Department of Biology, Massachusetts Institute of Technology, Cambridge
来源
FOLDING & DESIGN | 1996年 / 1卷 / 02期
关键词
D O I
10.1016/S1359-0278(96)00015-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Combinatorial mutagenesis experiments show the existence of many different solutions to the problem of complementary packing of non-polar sidechains in the protein core. They suggest that a significant amount of structural information is carried by the simple pattern of polar and non-polar residues along the polypeptide chain, indicate that the formation of buried polar interactions may be a fundamentally slow step in protein folding and show that proteins with many native properties occur at reasonable frequencies in random sequence libraries.
引用
收藏
页码:R27 / R30
页数:4
相关论文
共 31 条
[1]  
AXE DD, 1996, IN PRESS P NATL ACAD
[2]   THE ROLE OF BACKBONE FLEXIBILITY IN THE ACCOMMODATION OF VARIANTS THAT REPACK THE CORE OF T4-LYSOZYME [J].
BALDWIN, EP ;
HAJISEYEDJAVADI, O ;
BAASE, WA ;
MATTHEWS, BW .
SCIENCE, 1993, 262 (5140) :1715-1718
[3]   IDENTIFYING DETERMINANTS OF FOLDING AND ACTIVITY FOR A PROTEIN OF UNKNOWN STRUCTURE [J].
BOWIE, JU ;
SAUER, RT .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (07) :2152-2156
[4]   DECIPHERING THE MESSAGE IN PROTEIN SEQUENCES - TOLERANCE TO AMINO-ACID SUBSTITUTIONS [J].
BOWIE, JU ;
REIDHAAROLSON, JF ;
LIM, WA ;
SAUER, RT .
SCIENCE, 1990, 247 (4948) :1306-1310
[5]  
BREYER RM, 1989, J BIOL CHEM, V264, P13355
[6]   THE ROLE OF TURNS IN THE STRUCTURE OF AN ALPHA-HELICAL PROTEIN [J].
BRUNET, AP ;
HUANG, ES ;
HUFFINE, ME ;
LOEB, JE ;
WELTMAN, RJ ;
HECHT, MH .
NATURE, 1993, 364 (6435) :355-358
[7]   FOLDED PROTEINS OCCUR FREQUENTLY IN LIBRARIES OF RANDOM AMINO-ACID-SEQUENCES [J].
DAVIDSON, AR ;
SAUER, RT .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (06) :2146-2150
[8]   COOPERATIVELY FOLDED PROTEINS IN RANDOM SEQUENCE LIBRARIES [J].
DAVIDSON, AR ;
LUMB, KJ ;
SAUER, RT .
NATURE STRUCTURAL BIOLOGY, 1995, 2 (10) :856-864
[9]   DE-NOVO DESIGN OF THE HYDROPHOBIC CORES OF PROTEINS [J].
DESJARLAIS, JR ;
HANDEL, TM .
PROTEIN SCIENCE, 1995, 4 (10) :2006-2018
[10]   EXPLORING THE INTERFACE BETWEEN THE N-TERMINAL AND C-TERMINAL HELICES OF CYTOCHROME-C BY RANDOM MUTAGENESIS WITHIN THE C-TERMINAL HELIX [J].
FREDERICKS, ZL ;
PIELAK, GJ .
BIOCHEMISTRY, 1993, 32 (03) :929-936