Censor - A program for identification and elimination of repetitive elements from DNA sequences

被引：331

作者：

Jurka, J

Klonowski, P

Dagman, V

Pelton, P

机构：

[1] Linus Pauling Inst. of Sci. and Med., Palo Alto, CA 94306

来源：

COMPUTERS & CHEMISTRY | 1996年 / 20卷 / 01期

关键词：

D O I：

10.1016/S0097-8485(96)80013-1

中图分类号：

O6 [化学];

学科分类号：

0703 ;

摘要：

CENSOR is a program designed to identify and eliminate fragments of DNA sequences homologous to any chosen reference sequences, in particular to repetitivte elements. CENSOR is based on two principal algorithms of Smith & Waterman (1981) [J. Mol. Biol. 147, 195] and Wilbur & Lipman (1983) [Proc. Natl Acad. Sci. U.S.A. 80, 726]. It includes several pre-set sensitivity levels based on both biological and statistical criteria which help to distinguish between aligned pairs of homologous and non-homologous sequences. CENSOR has been implemented in C/C + + in the SUN/UNIX environment.

引用

页码：119 / 121

页数：3

共 12 条

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