A novel endogenous retrovirus-related element in the human genome resembles a DNA transposon: Evidence for an evolutionary link?

被引:19
作者
Hughes, JF
Coffin, JM
机构
[1] Tufts Univ, Sch Med, Dept Mol Biol & Microbiol, Boston, MA 02111 USA
[2] Tufts Univ, Sch Med, Genet Program, Boston, MA 02111 USA
[3] Amer Canc Soc, Atlanta, GA 30329 USA
关键词
D O I
10.1006/geno.2002.6856
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A significant fraction of the human genome is composed of various types of transposable elements, which are divided into two broad classes based on their mechanism of transposition: via an RNA intermediate (retroelements) or via a DNA intermediate (DNA transposons). The retroelements, which include endogenous retroviruses, are the more prominent group in humans and seem to be restricted to eukaryotes. DNA transposons are known in almost all well-studied organisms, including bacteria. In the human genome, they exist as mere fossils and seem to have been inactive for millions of years. We report here an element in the human genome that is the pro duct of a recent retro-transposition event, yet apparently, by a novel mechanism of reverse transcription, has acquired inverted repeats more characteristic of DNA transposons.
引用
收藏
页码:453 / 455
页数:3
相关论文
共 9 条
[1]   HUMAN AND OTHER MAMMALIAN GENOMES CONTAIN TRANSPOSONS OF THE MARINER FAMILY [J].
AUGEGOUILLOU, C ;
BIGOT, Y ;
POLLET, N ;
HAMELIN, MH ;
MEUNIERROTIVAL, M ;
PERIQUET, G .
FEBS LETTERS, 1995, 368 (03) :541-546
[2]  
Capy P, 1996, J MOL EVOL, V42, P359, DOI 10.1007/BF02337546
[3]   UNITY IN TRANSPOSITION REACTIONS [J].
CRAIG, NL .
SCIENCE, 1995, 270 (5234) :253-254
[4]   Initial sequencing and analysis of the human genome [J].
Lander, ES ;
Int Human Genome Sequencing Consortium ;
Linton, LM ;
Birren, B ;
Nusbaum, C ;
Zody, MC ;
Baldwin, J ;
Devon, K ;
Dewar, K ;
Doyle, M ;
FitzHugh, W ;
Funke, R ;
Gage, D ;
Harris, K ;
Heaford, A ;
Howland, J ;
Kann, L ;
Lehoczky, J ;
LeVine, R ;
McEwan, P ;
McKernan, K ;
Meldrim, J ;
Mesirov, JP ;
Miranda, C ;
Morris, W ;
Naylor, J ;
Raymond, C ;
Rosetti, M ;
Santos, R ;
Sheridan, A ;
Sougnez, C ;
Stange-Thomann, N ;
Stojanovic, N ;
Subramanian, A ;
Wyman, D ;
Rogers, J ;
Sulston, J ;
Ainscough, R ;
Beck, S ;
Bentley, D ;
Burton, J ;
Clee, C ;
Carter, N ;
Coulson, A ;
Deadman, R ;
Deloukas, P ;
Dunham, A ;
Dunham, I ;
Durbin, R ;
French, L .
NATURE, 2001, 409 (6822) :860-921
[5]   Inhibition of ribozymes by deoxyribonucleotides and the origin of DNA [J].
Leon, PE .
JOURNAL OF MOLECULAR EVOLUTION, 1998, 47 (02) :122-126
[6]   A recombination hotspot responsible for two inherited peripheral neuropathies is located near a mariner transposon-like element [J].
Reiter, LT ;
Murakami, T ;
Koeuth, T ;
Pentao, L ;
Muzny, DM ;
Gibbs, RA ;
Lupski, JR .
NATURE GENETICS, 1996, 12 (03) :288-297
[7]   Members of the pogo superfamily of DNA-mediated transposons in the human genome [J].
Robertson, HM .
MOLECULAR AND GENERAL GENETICS, 1996, 252 (06) :761-766
[8]   Tiggers and other DNA transposon fossils in the human genome [J].
Smit, AFA ;
Riggs, AD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (04) :1443-1448
[9]   The sequence of the human genome [J].
Venter, JC ;
Adams, MD ;
Myers, EW ;
Li, PW ;
Mural, RJ ;
Sutton, GG ;
Smith, HO ;
Yandell, M ;
Evans, CA ;
Holt, RA ;
Gocayne, JD ;
Amanatides, P ;
Ballew, RM ;
Huson, DH ;
Wortman, JR ;
Zhang, Q ;
Kodira, CD ;
Zheng, XQH ;
Chen, L ;
Skupski, M ;
Subramanian, G ;
Thomas, PD ;
Zhang, JH ;
Miklos, GLG ;
Nelson, C ;
Broder, S ;
Clark, AG ;
Nadeau, C ;
McKusick, VA ;
Zinder, N ;
Levine, AJ ;
Roberts, RJ ;
Simon, M ;
Slayman, C ;
Hunkapiller, M ;
Bolanos, R ;
Delcher, A ;
Dew, I ;
Fasulo, D ;
Flanigan, M ;
Florea, L ;
Halpern, A ;
Hannenhalli, S ;
Kravitz, S ;
Levy, S ;
Mobarry, C ;
Reinert, K ;
Remington, K ;
Abu-Threideh, J ;
Beasley, E .
SCIENCE, 2001, 291 (5507) :1304-+