Stenotrophomonas terrae sp nov and Stenotrophomonas humi sp nov., two nitrate-reducing bacteria isolated from soil

被引：62

作者：

Heylen, Kim ^{[1
]}

Vanparys, Bram ^{[1
]}

Peirsegaele, Filip ^{[1
]}

Lebbe, Liesbeth ^{[1
]}

De Vos, Paul ^{[1
]}

机构：

[1] Univ Ghent, Microbiol Lab, Dept Biochem Physiol & Microbiol, B-9000 Ghent, Belgium

来源：

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | 2007年 / 57卷

关键词：

D O I：

10.1099/ijs.0.65044-0

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Three Gram-negative, rod-shaped, non-spore-forming, nitrate-reducing isolates (R-32746, R-32768(T) and R-32729(T)) were obtained from soil. Analysis of repetitive sequence-based PCR showed that the three isolates represented two different strains. 16S rRNA gene sequence analysis and DNA-DNA hybridization placed them within the genus Stenotrophomonas and revealed that they were genotypically different from each other and from all recognized Stenotrophomonas species. Analysis of the fatty acid composition and physiological and biochemical tests allowed differentiation from their closest phylogenetic neighbours. They are therefore considered to represent two novel species, for which the names Stenotrophomonas terrae sp. nov. and Stenotrophomonas humi sp. nov. are proposed, with strains R-32768T (= LMG 23958(T) = DSMI 18941(T)) and R-32729(T) (=LMG 23959(T) =DSM 18929(T)), respectively, as the type strains.

引用

页码：2056 / 2061

页数：6

共 26 条

[1]

[Anonymous], CHEM METHODS PROKARY

[2] Stenotrophomonas acidaminiphila sp nov., a strictly aerobic bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor [J].

Assih, EA ;

Ouattara, AS ;

Thierry, S ;

Cayol, JL ;

Labat, M ;

Macarie, H .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2002, 52 :559-568

[3] Stenotrophomonas africana Drancourt et al. 1997 is a later synonym of Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993 [J].

Coenye, T ;

Vanlaere, E ;

Falsen, E ;

Vandamme, P .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 :1235-1237

[4] Identification of genomic groups in the genus Stenotrophomonas using gyrB RFLP analysis [J].

Coenye, T ;

Vanlaere, E ;

LiPuma, JJ ;

Vandamme, P .

FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY, 2004, 40 (03) :181-185

[5] Comparative assessment of genotyping methods for epidemiologic study of Burkholderia cepacia genomovar III [J].

Coenye, T ;

Spilker, T ;

Martin, A ;

LiPuma, JJ .

JOURNAL OF CLINICAL MICROBIOLOGY, 2002, 40 (09) :3300-3307

[6] Stenotrophomonas africana sp nov, an opportunistic human pathogen in Africa [J].

Drancourt, M ;

Bollet, C ;

Raoult, D .

INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1997, 47 (01) :160-163

[7] FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].

EZAKI, T ;

HASHIMOTO, Y ;

YABUUCHI, E .

INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229

[8] Characterization of N2O-producing Xanthomonas-like isolates from biofilters as Stenotrophomonas nitritireducens sp nov., Luteimonas mephitis gen. nov., sp nov and Pseudoxanthomonas broegbernensis gen. nov., sp nov. [J].

Finkmann, W ;

Altendorf, K ;

Stackebrandt, E ;

Lipski, A .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :273-282

[9] Genomic diversity of the genus Stenotrophomonas [J].

Hauben, L ;

Vauterin, L ;

Moore, ERB ;

Hoste, B ;

Swings, J .

INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1999, 49 :1749-1760

[10] Cultivation of denitrifying bacteria: Optimization of isolation conditions and diversity study [J].

Heylen, K ;

Vanparys, B ;

Wittebolle, L ;

Verstraete, W ;

Boon, N ;

De Vos, P .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (04) :2637-2643

← 1 2 3 →