A polycarbonate based surface plasmon resonance sensing cartridge for high sensitivity HBV loop-mediated isothermal amplification

被引:73
作者
Chuang, Tsung-Liang [1 ]
Wei, Shih-Chung [2 ]
Lee, Szu-Yuan
Lin, Chii-Wann [1 ,2 ]
机构
[1] Natl Taiwan Univ, Inst Biomed Engn, Taipei 10764, Taiwan
[2] Natl Taiwan Univ, Inst Biomed Elect & Bioinformat, Taipei 10764, Taiwan
关键词
Hepatitis B virus; Loop-mediated isothermal amplification; Polycarbonate; SPRLAMP sensing cartridge; RAPID DETECTION; DNA AMPLIFICATION; VIRUS DNA; BIOSENSORS; TECHNOLOGIES; CIRRHOSIS; COMPACT; SYSTEM; AGENTS; LEVEL;
D O I
10.1016/j.bios.2011.11.037
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
In this study, we report a simple, low-cost surface plasmon resonance (SPR)-sensing cartridge based on a loop-mediated isothermal amplification (LAMP) method for the on-site detection of the hepatitis B virus (HBV). For LAMP detection, a SPR based LAMP sensing system (SPRLAMP) was constructed, including a novel SPRLAMP sensing cartridge integrating a polymethyl methacrylate (PMMA) micro-reactor with a polycarbonate (PC)-based prism coated with a 50 nm Au film. First, we found that the change of refractive index of the bulk solution was approximately 0.0011 refractive index (RI) units after LAMP reaction. The PC-based prism's linearity and thermal responses were compared to those of a traditional glass prism to show that a PC-based prism can be used for SPR measurement. Finally, the HBV template mixed in the 10 mu l LAMP solution could be detected by SPRLAMP system in 17 min even at the detection-limited concentration of 2 fg/ml. We also analyzed the correlation coefficients between the initial concentrations of HBV DNA templates and the system response (Delta RU) at varying amplification times to establish an optimal amplification time endpoint of 25 min (R-2=0.98). In conclusion, the LAMP reaction could be detected with the SPRLAMP sensing cartridge based on direct sensing of the bulk refractive index. Crown Copyright (C) 2011 Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:89 / 95
页数:7
相关论文
共 46 条
[1]   Orientation and capturing of antibody affinity ligands: Applications to surface plasmon resonance biochips [J].
Bergstrom, Gunnar ;
Mandenius, Carl-Fredrik .
SENSORS AND ACTUATORS B-CHEMICAL, 2011, 158 (01) :265-270
[2]   Center wavelength shift dependence on substrate coefficient of thermal expansion for optical thin-film interference filters deposited by ion-beam sputtering [J].
Brown, JT .
APPLIED OPTICS, 2004, 43 (23) :4506-4511
[3]  
Cadwell R C, 1992, PCR Methods Appl, V2, P28, DOI 10.1101/gr.2.1.28
[4]  
CARRINO JJ, 1995, J MICROBIOL METH, V23, P3, DOI 10.1016/0167-7012(95)00024-F
[5]   High-Sensitivity Detection of Carbohydrate Antigen 15-3 Using a Gold/Zinc Oxide Thin Film Surface Plasmon Resonance-Based Biosensor [J].
Chang, Chia-Chen ;
Chiu, Nan-Fu ;
Lin, David Shenhsiung ;
Chu-Su, Yu ;
Liang, Yang-Hung ;
Lin, Chii-Wann .
ANALYTICAL CHEMISTRY, 2010, 82 (04) :1207-1212
[6]   A sensitivity comparison of optical biosensors based on four different surface plasmon resonance modes [J].
Chien, FC ;
Chen, SJ .
BIOSENSORS & BIOELECTRONICS, 2004, 20 (03) :633-642
[7]   Compact, high performance surface plasmon resonance imaging system [J].
Chinowsky, Timothy M. ;
Grow, Michael S. ;
Johnston, Kyle S. ;
Nelson, Kjell ;
Edwards, Thayne ;
Fu, Elain ;
Yager, Paul .
BIOSENSORS & BIOELECTRONICS, 2007, 22 (9-10) :2208-2215
[8]   A branched DNA signal amplification assay for quantification of nucleic acid targets below 100 molecules/ml [J].
Collins, ML ;
Irvine, B ;
Tyner, D ;
Fine, E ;
Zayati, C ;
Chang, CA ;
Horn, T ;
Ahle, D ;
Detmer, J ;
Shen, LP ;
Kolberg, J ;
Bushnell, S ;
Urdea, MS ;
Ho, DD .
NUCLEIC ACIDS RESEARCH, 1997, 25 (15) :2979-2984
[9]   NUCLEIC-ACID SEQUENCE-BASED AMPLIFICATION [J].
COMPTON, J .
NATURE, 1991, 350 (6313) :91-92
[10]  
Cooney C., 2011, BIOMED MICRODEVICES, P1