Functional and Evolutionary Insights from the Genomes of Three Parasitoid Nasonia Species

被引:658
作者
Werren, John H. [1 ]
Richards, Stephen [2 ]
Desjardins, Christopher A. [1 ]
Niehuis, Oliver [3 ]
Gadau, Juergen [3 ]
Colbourne, John K. [4 ]
Beukeboom, Leo W. [5 ]
Desplan, Claude [6 ]
Elsik, Christine G. [7 ]
Grimmelikhuijzen, Cornelis J. P. [8 ]
Kitts, Paul [9 ]
Lynch, Jeremy A. [10 ]
Murphy, Terence [9 ]
Oliveira, Deodoro C. S. G. [1 ]
Smith, Christopher D. [11 ,12 ]
van de Zande, Louis [5 ]
Worley, Kim C. [2 ]
Zdobnov, Evgeny M. [13 ,14 ,15 ]
Aerts, Maarten [16 ]
Albert, Stefan [17 ,18 ]
Anaya, Victor H. [19 ]
Anzola, Juan M. [20 ]
Barchuk, Angel R. [21 ]
Behura, Susanta K. [22 ]
Bera, Agata N. [23 ]
Berenbaum, May R. [24 ]
Bertossa, Rinaldo C. [25 ]
Bitondi, Marcia M. G. [26 ]
Bordenstein, Seth R. [27 ,28 ]
Bork, Peer [29 ]
Bornberg-Bauer, Erich [30 ]
Brunain, Marleen [31 ]
Cazzamali, Giuseppe [8 ]
Chaboub, Lesley [2 ]
Chacko, Joseph [2 ]
Chavez, Dean [2 ]
Childers, Christopher P. [7 ]
Choi, Jeong-Hyeon [4 ]
Clark, Michael E. [1 ]
Claudianos, Charles [32 ]
Clinton, Rochelle A. [33 ,34 ]
Cree, Andrew G. [2 ]
Cristino, Alexandre S. [32 ,35 ]
Dang, Phat M. [36 ]
Darby, Alistair C. [37 ]
de Graaf, Dirk C. [31 ]
Devreese, Bart [16 ]
Dinh, Huyen H. [2 ]
Edwards, Rachel [1 ]
Elango, Navin [38 ]
机构
[1] Univ Rochester, Dept Biol, Rochester, NY 14627 USA
[2] Baylor Coll Med, Human Genome Sequencing Ctr, Houston, TX 77030 USA
[3] Arizona State Univ, Sch Life Sci, Tempe, AZ 85287 USA
[4] Indiana Univ, Ctr Genom & Bioinformat, Bloomington, IN 47405 USA
[5] Univ Groningen, Evolutionary Genet Ctr Ecol & Evolutionary Studie, NL-9750 AA Haren, Netherlands
[6] NYU, Dept Biol, New York, NY 10003 USA
[7] Georgetown Univ, Dept Biol, Washington, DC 20057 USA
[8] Univ Copenhagen, Dept Biol, Ctr Comparat & Funct Insect Genom, DK-2100 Copenhagen, Denmark
[9] Natl Lib Med, Natl Ctr Biotechnol Informat, NIH, Bethesda, MD 20894 USA
[10] Univ Cologne, Inst Entwicklungsphysiol, D-50923 Cologne, Germany
[11] San Francisco State Univ, Dept Biol, San Francisco, CA 94132 USA
[12] Univ Calif Berkeley, Lawrence Berkeley Lab, Drosophila Heterochromatin Genome Project, Berkeley, CA 94720 USA
[13] Univ Geneva, Sch Med, Dept Genet Med & Dev, CH-1211 Geneva, Switzerland
[14] Swiss Inst Bioinformat, CH-1211 Geneva, Switzerland
[15] Univ London Imperial Coll Sci Technol & Med, London SW7 2AZ, England
[16] Univ Ghent, Lab Prot Biochem & Biomol Engn, B-9000 Ghent, Belgium
[17] Univ Wurzburg, BEEgrp, D-97082 Wurzburg, Germany
[18] Univ Wurzburg, Inst Pharmaceut Biol, D-97082 Wurzburg, Germany
[19] Humboldt Univ, Inst Theoret Biol, D-10115 Berlin, Germany
[20] Texas A&M Univ, College Stn, TX 77843 USA
[21] Univ Fed Alfenas, Dept Ciencias Biomed, BR-37130000 Alfenas, MG, Brazil
[22] Univ Notre Dame, Dept Biol Sci, Eck Inst Global Hlth, Notre Dame, IN 46556 USA
[23] Univ Oxford, Dept Physiol Anat & Genet, MRC, Funct Genom Unit, Oxford OX1 3QX, England
[24] Univ Illinois, Dept Entomol, Urbana, IL 61801 USA
[25] Univ Groningen, Chronobiol Ctr Behav & Neurosci, NL-9750 AA Haren, Netherlands
[26] Univ Sao Paulo, Dept Biol, Fac Filosofia Ciencias & Letras Ribeirao Pret, BR-14040901 Sao Paulo, Brazil
[27] Vanderbilt Univ, Dept Biol Sci, Nashville, TN 37235 USA
[28] Marine Biol Lab, Josephine Bay Paul Ctr Comparat Mol Biol & Evolut, Woods Hole, MA 02536 USA
[29] European Mol Biol Lab, D-69117 Heidelberg, Germany
[30] Univ Munster, Inst Evolut & Biodivers, D-48143 Munster, Germany
[31] Univ Ghent, Lab Zoophysiol, B-9000 Ghent, Belgium
[32] Univ Queensland, Queensland Brain Inst, Brisbane, Qld 4072, Australia
[33] Montana State Univ, Dept Microbiol, Bozeman, MT 59715 USA
[34] Montana State Univ, Ctr Computat Biol, Bozeman, MT 59715 USA
[35] Univ Sao Paulo, Dept Fis & Informat, Inst Fis Sao Carlos, BR-13560970 Sao Paulo, Brazil
[36] ARS, Subtrop Insects Res Unit, USDA, US Hort Res Lab, Ft Pierce, FL 34945 USA
[37] Univ Liverpool, Sch Biol Sci, Liverpool L69 7ZB, Merseyside, England
[38] Georgia Inst Technol, Sch Biol, Atlanta, GA 30332 USA
[39] Univ Houston, Dept Biol & Biochem, Houston, TX 77204 USA
[40] ARS, Bee Res Lab, USDA, Beltsville, MD 20705 USA
[41] James Cook Univ, Australian Res Council, Ctr Excellence Coral Reef Studies, Townsville, Qld 4811, Australia
[42] Indiana Univ, Dept Biol, Bloomington, IN 47405 USA
[43] Rhein Westfal TH Aachen, Inst Physiol, D-52074 Aachen, Germany
[44] Umea Univ, Dept Mol Biol, S-90187 Umea, Sweden
[45] Univ Nebraska, Dept Entomol, Lincoln, NE 68583 USA
[46] Nagoya Univ, Grad Sch Bioagr Sci, Nagoya, Aichi 4648601, Japan
[47] Indiana Univ, Sch Informat, Bloomington, IN 47405 USA
[48] Univ Illinois, Dept Comp Sci, Urbana, IL 61801 USA
[49] Univ Geneva, Sch Med, Dept Struct Biol & Bioinformat, CH-1211 Geneva, Switzerland
[50] Australian Natl Univ, Res Sch Biol, Canberra, ACT 2601, Australia
基金
美国国家科学基金会;
关键词
WASP NASONIA; DNA METHYLATION; SOCIAL INSECTS; APIS-MELLIFERA; VITRIPENNIS; HYMENOPTERA; GENES; PTEROMALIDAE; DROSOPHILA; HONEYBEE;
D O I
10.1126/science.1178028
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We report here genome sequences and comparative analyses of three closely related parasitoid wasps: Nasonia vitripennis, N. giraulti, and N. longicornis. Parasitoids are important regulators of arthropod populations, including major agricultural pests and disease vectors, and Nasonia is an emerging genetic model, particularly for evolutionary and developmental genetics. Key findings include the identification of a functional DNA methylation tool kit; hymenopteran-specific genes including diverse venoms; lateral gene transfers among Pox viruses, Wolbachia, and Nasonia; and the rapid evolution of genes involved in nuclear-mitochondrial interactions that are implicated in speciation. Newly developed genome resources advance Nasonia for genetic research, accelerate mapping and cloning of quantitative trait loci, and will ultimately provide tools and knowledge for further increasing the utility of parasitoids as pest insect-control agents.
引用
收藏
页码:343 / 348
页数:6
相关论文
共 39 条
  • [1] [Anonymous], COLD SPRING HARB PRO
  • [2] Genome-wide variation in the human and fruitfly: a comparison
    Aquadro, CF
    DuMont, VB
    Reed, FA
    [J]. CURRENT OPINION IN GENETICS & DEVELOPMENT, 2001, 11 (06) : 627 - 634
  • [3] Sex determination in the haplodiploid wasp Nasonia vitripennis (Hymenoptera: Chalcidoidea):: A critical consideration of models and evidence
    Beukeboom, Leo W.
    Kamping, Albert
    van de Zande, Louis
    [J]. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 2007, 18 (03) : 371 - 378
  • [4] BREEUWER JAJ, 1995, EVOLUTION, V49, P705, DOI 10.1111/j.1558-5646.1995.tb02307.x
  • [5] Permissive and instructive anterior patterning rely on mRNA localization in the wasp embryo
    Brent, Ava E.
    Yucel, Gozde
    Small, Stephen
    Desplan, Claude
    [J]. SCIENCE, 2007, 315 (5820) : 1841 - 1843
  • [6] Poxvirus Host Range Protein CP77 Contains an F-Box-Like Domain That Is Necessary To Suppress NF-κB Activation by Tumor Necrosis Factor Alpha but Is Independent of Its Host Range Function
    Chang, Shu-Jung
    Hsiao, Jye-Chian
    Sonnberg, Stephanie
    Chiang, Cheng-Ting
    Yang, Min-Hsiang
    Tzou, Der-Lii
    Mercer, Andrew A.
    Chang, Wen
    [J]. JOURNAL OF VIROLOGY, 2009, 83 (09) : 4140 - 4152
  • [7] Insights into the venom composition of the ectoparasitoid wasp Nasonia vitripennis from bioinformatic and proteomic studies
    de Graaf, D. C.
    Aerts, M.
    Brunain, M.
    Desjardins, C. A.
    Jacobs, F. J.
    Werren, J. H.
    Devreese, B.
    [J]. INSECT MOLECULAR BIOLOGY, 2010, 19 : 11 - 26
  • [8] The genetic basis of interspecies host preference differences in the model parasitoid Nasonia
    Desjardins, C. A.
    Perfectti, F.
    Bartos, J. D.
    Enders, L. S.
    Werren, J. H.
    [J]. HEREDITY, 2010, 104 (03) : 270 - 277
  • [9] Evolution of the Yellow/Major Royal Jelly Protein family and the emergence of social behavior in honey bees
    Drapeau, Mark David
    Albert, Stefan
    Kucharski, Robert
    Prusko, Carsten
    Maleszka, Ryszard
    [J]. GENOME RESEARCH, 2006, 16 (11) : 1385 - 1394
  • [10] DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera
    Elango, Navin
    Hunt, Brendan G.
    Goodisman, Michael A. D.
    Yi, Soojin V.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (27) : 11206 - 11211