X-ray structures of a novel acid phosphatase from Escherichia blattae and its complex with the transition-state analog molybdate

被引:87
作者
Ishikawa, K
Mihara, Y
Gondoh, K
Suzuki, E
Asano, Y
机构
[1] Ajinomoto Co Inc, Cent Res Labs, Kawasaki Ku, Kawasaki, Kanagawa 2108681, Japan
[2] Ajinomoto Co Inc, Fermentat & Biotechnol Labs, Kawasaki Ku, Kawasaki, Kanagawa 2108681, Japan
[3] Toyama Prefectural Univ, Biotechnol Res Ctr, Fac Engn, Toyama 9390398, Japan
关键词
crystal structure; Escherichia blattae; hexamer; non-specific acid phosphatase; protein crystallography;
D O I
10.1093/emboj/19.11.2412
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The structure of Escherichia blattae non-specific acid phosphatase (EB-NSAP) has been determined at 1.9 Angstrom resolution with a bound sulfate marking the phosphate-binding site. The enzyme is a 150 kDa homo-hexamer, EB-NSAP shares a conserved sequence motif not only with several lipid phosphatases and the mammalian glucose-6-phosphatases, but also with the vanadium-containing chloroperoxidase (CPO) of Curvularia inaequalis. Comparison of the crystal structures of EB-NSAP and CPO reveals striking similarity in the active site structures. In addition, the topology of the EB-NSAP core shows considerable similarity to the fold of the active site containing part of the monomeric 67 kDa CPO, despite the lack of further sequence identity. These two enzymes are apparently related by divergent evolution. We have also determined the crystal structure of EB-NSAP complexed with the transition-state analog molybdate. Structural comparison of the native enzyme and the enzyme-molybdate complex reveals that the sidechain of His150, a putative catalytic residue, moves toward the molybdate so that it forms a hydrogen bond with the metal oxyanion when the molybdenum forms a covalent bond with NE2 of His189.
引用
收藏
页码:2412 / 2423
页数:12
相关论文
共 40 条
[1]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]  
BRADFORD MM, 1976, ANAL BIOCHEM, V72, P248, DOI 10.1016/0003-2697(76)90527-3
[3]   CRYSTALLOGRAPHIC R-FACTOR REFINEMENT BY MOLECULAR-DYNAMICS [J].
BRUNGER, AT ;
KURIYAN, J ;
KARPLUS, M .
SCIENCE, 1987, 235 (4787) :458-460
[4]   DIRECT COLORIMETRIC DETERMINATION OF PHOSPHORUS IN SERUM AND URINE [J].
DREWES, PA .
CLINICA CHIMICA ACTA, 1972, 39 (01) :81-&
[5]   Crystal structure of mammalian purple acid phosphatase [J].
Guddat, LW ;
McAlpine, AS ;
Hume, D ;
Hamilton, S ;
de Jersey, J ;
Martin, JL .
STRUCTURE WITH FOLDING & DESIGN, 1999, 7 (07) :757-767
[6]   A new model for the membrane topology of glucose-6-phosphatase: The enzyme involved in von Gierke disease [J].
Hemrika, W ;
Wever, R .
FEBS LETTERS, 1997, 409 (03) :317-319
[7]   From phosphatases to vanadium peroxidases: A similar architecture of the active site [J].
Hemrika, W ;
Renirie, R ;
Dekker, HL ;
Barnett, P ;
Wever, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (06) :2145-2149
[8]   THE PROCESSING OF DIFFRACTION DATA TAKEN ON A SCREENLESS WEISSENBERG CAMERA FOR MACROMOLECULAR CRYSTALLOGRAPHY [J].
HIGASHI, T .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1989, 22 :9-18
[9]   HALOPEROXIDASE-CATALYZED HALOGENATION OF NITROGEN-CONTAINING AROMATIC HETEROCYCLES REPRESENTED BY NUCLEIC BASES [J].
ITOH, N ;
IZUMI, Y ;
YAMADA, H .
BIOCHEMISTRY, 1987, 26 (01) :282-289
[10]   MOLECULAR ANALYSIS OF THE SALMONELLA-TYPHIMURIUM PHON GENE, WHICH ENCODES NONSPECIFIC ACID-PHOSPHATASE [J].
KASAHARA, M ;
NAKATA, A ;
SHINAGAWA, H .
JOURNAL OF BACTERIOLOGY, 1991, 173 (21) :6760-6765