Cytosine methylation is the major covalent modification of mammalian genomic DNA and plays important roles in transcriptional regulation. The molecular mechanism underlying the enzymatic removal of this epigenetic mark, however, remains elusive. Here, we show that 5-methylcytosine (5mC) hydroxylase TET1, by converting 5mCs to 5-hydroxymethylcytosines (5hmCs), promotes DNA demethylation in mammalian cells through a process that requires the base excision repair pathway. Though expression of the 12 known human DNA glycosylases individually did not enhance removal of 5hmCs in mammalian cells, demethylation of both exogenously introduced and endogenous 5hmCs is promoted by the AID (activation-induced deaminase)/APOBEC (apolipoprotein B mRNA-editing enzyme complex) family of cytidine deaminases. Furthermore, Tet1 and Apobec1 are involved in neuronal activity-induced, region-specific, active DNA demethylation and subsequent gene expression in the dentate gyrus of the adult mouse brain in vivo. Our study suggests a TET1-induced oxidation-deamination mechanism for active DNA demethylation in mammals.
机构:Loma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USA
Baker, D
;
Liu, PF
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机构:Loma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USA
Liu, PF
;
Burdzy, A
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机构:Loma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USA
Burdzy, A
;
Sowers, LC
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Loma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USALoma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USA
机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Chaudhuri, J
;
Tian, M
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机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Tian, M
;
Khuong, C
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机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Khuong, C
;
Chua, K
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机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Chua, K
;
Pinaud, E
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机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Pinaud, E
;
Alt, FW
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机构:
Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USAChildrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
机构:Loma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USA
Baker, D
;
Liu, PF
论文数: 0引用数: 0
h-index: 0
机构:Loma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USA
Liu, PF
;
Burdzy, A
论文数: 0引用数: 0
h-index: 0
机构:Loma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USA
Burdzy, A
;
Sowers, LC
论文数: 0引用数: 0
h-index: 0
机构:
Loma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USALoma Linda Univ, Sch Med, Dept Biochem & Microbiol, Loma Linda, CA 92350 USA
机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Chaudhuri, J
;
Tian, M
论文数: 0引用数: 0
h-index: 0
机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Tian, M
;
Khuong, C
论文数: 0引用数: 0
h-index: 0
机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Khuong, C
;
Chua, K
论文数: 0引用数: 0
h-index: 0
机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Chua, K
;
Pinaud, E
论文数: 0引用数: 0
h-index: 0
机构:Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
Pinaud, E
;
Alt, FW
论文数: 0引用数: 0
h-index: 0
机构:
Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USAChildrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA