PhyloWidget: web-based visualizations for the tree of life

被引:100
作者
Jordan, Gregory E. [1 ]
Piel, William H. [2 ]
机构
[1] EMBL EBI, Cambridge CB10 1SD, England
[2] Yale Univ, Peabody Museum Nat Hist, New Haven, CT 06520 USA
基金
美国国家科学基金会;
关键词
D O I
10.1093/bioinformatics/btn235
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
PhyloWidget is a web-based tool for the visualization and manipulation of phylogenetic tree data. It can be accessed online or downloaded as a standalone application. A simple URL-based API allows databases to easily link to and customize PhyloWidget for interactively viewing medium- to large-sized trees.
引用
收藏
页码:1641 / 1642
页数:2
相关论文
共 15 条
[1]  
[Anonymous], MESQUITE MODULAR SYS
[2]  
[Anonymous], 1989, Cladistics, DOI DOI 10.1111/J.1096-0031.1989.TB00562.X
[3]  
Darwin C., 1859, ORIGIN SPECIES MEANS, DOI [DOI 10.5962/BHL.TITLE.82303, 10.5962/bhl.title.82303]
[4]  
Felsenstein J., 2008, PHYLOGENY PROGRAMS
[5]   Phylogenetic methods come of age: Testing hypotheses in an evolutionary context [J].
Huelsenbeck, JP ;
Rannala, B .
SCIENCE, 1997, 276 (5310) :227-232
[6]   Dendroscope: An interactive viewer for large phylogenetic trees [J].
Huson, Daniel H. ;
Richter, Daniel C. ;
Rausch, Christian ;
Dezulian, Tobias ;
Franz, Markus ;
Rupp, Regula .
BMC BIOINFORMATICS, 2007, 8
[7]   Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation [J].
Letunic, Ivica ;
Bork, Peer .
BIOINFORMATICS, 2007, 23 (01) :127-128
[8]   TreeBASE: The roots of phylogeny [J].
Morell, V .
SCIENCE, 1996, 273 (5275) :569-569
[9]   Requirements of phylogenetic databases [J].
Nakhleh, L ;
Miranker, D ;
Barbancon, F ;
Piel, WH ;
Donoghue, M .
THIRD IEEE SYMPOSIUM ON BIOINFORMATICS AND BIOENGINEERING - BIBE 2003, PROCEEDINGS, 2003, :141-148
[10]  
Page RDM, 1996, COMPUT APPL BIOSCI, V12, P357